Gene detail

Detailed information of RMX48648.1 in Pocillopora damicornis

Genomic Location: SczhEnG_2250:421703...422539
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04116 all species →	FA_hydroxylase	Fatty acid hydroxylase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050307 all species →	Family	Sterol Desaturase and Related Enzymes	Interproscan
IPR006694 all species →	Domain	Fatty acid hydroxylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11863 all species →	STEROL DESATURASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000248 all species →	Molecular Function	C-5 sterol desaturase activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016126 all species →	Biological Process	sterol biosynthetic process	Interproscan
GO:0033490 all species →	Biological Process	cholesterol biosynthetic process via lathosterol	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0008610 all species →	Biological Process	lipid biosynthetic process	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00227	SC5DL, ERG3; Delta7-sterol 5-desaturase	EC:1.14.19.20	Steroid biosynthesis	ko00100	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.