Gene detail

Detailed information of RMX49576.1 in Pocillopora damicornis

Genomic Location: SczhEnG_2088:96374...120537
NR annotation: no NCBI-NR hit recorded
Species abbreviation PDAMI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

pdam_00017622

ATGCCTGTGGAGGAGAAGAGAGACAAGGCACAGACATCTACAGTGAATAGGGAGAATGAAGAAAAAGATTTATCCAGATTGTTAGACCTGCTAAACACCCCAGCCAGCAAACAACAGCTTCCTTCCATCTCTTGGATCCCAGATGAAAATCAGAACACCACAGGTAATCCATGGGCTGGGCAGGCAAATGGAGTGTTACCCCATCAACACCAGTCAACTGAAGCTCTTGCTTTGGAGAAATTCAGCTCCAGGTACCAGGGAGTCAGGAATTTCAGTTCACATGCCCTCAGCAGTTACTTCAGCCAGATTTTCACAGCCCTTGTAAAGCAGCGAGTTTGCTACCTGGAGTGGATTGAACGAGTTCCTCCAGAAAATATTCTGAGAGTGCTAATATGCCTCAGAATGCTCATGAGGGACCACACATTTCAGGTTGAATTTTTCAATCTAGGTGGTGTGAAAGTCCTTGCAGAGAGGCTACAACTATTGACTGAAAGTTATCTTGAGAATGGAGAAGAGCCATTTACTGTTGACATTCTGAAAGAAATGACAAACATTTGTCAGAAACTTGCTGCAGATGTTAAGCAGAGGGAGTGGCTTGTGGCATGTTGTACTCATAAGGCTCTTGTTCTTCTGTTATCTGCTAGTGATGTGATGGTTCTTCATTGTTCCTTGTACGCCCTGATTGGTTTGGCTCAAAGTGAGAGACCACGAGCTCTGATTGGTGAATTGAATTGCACAGAGATTCTATTAAGAATATTACAGGAATATGACATCCTTTCTAAAACTCTGGCAGCTGGTCTTCTGAGAATACTGTGTGCTGACAGCAGTATCAGAGAGCAGGTTAAGGTCTTTGATGGAATCCCAATTTGTCTGAGCTTGCTACATTGTGAAAATCTCAAGCTTCTGTGGAACGTGGTATGGATTATTGTACAACTGGCTGAAGATAGTGACTCAAGCAATGACATCAGAGTTCTTGGTGGAATTCCTTTACTTCTGGCACTTCTTCAAGATCGGAAGCCAGAGTCAAGTGCTGAAGTATTATATCTGGGCTCTGATACAACTTCAAAAGCATCAATCAGTGCAGAGACTGAGGCTGATTCTGGAGAAGATACCATGCCTTTGAAAATTGCTGTGTGCTCTGCCCTGACTGAGCTTGTTGTCAATGACACTAATGGACAGCAAATTGTGCAGTCAAACGGTATTTACTTGCTGGGATTACTTATTCTGCCCCAAGAAATGTCTTCTTCTGAGGAAGCCGCAACTGTAGAACACCTTCAGAAAAGCGCATTCAGGGCTTTGAGATTCTTGTTTAGTATGGAGCGAAATCGTCAACTCTTCAAGAGATTGTTTCCCCCAGACCTTTTCGAGAAATTTATTGATGTCGGTCATTACGTCAGGGAATTAAATGCCTACAAGTGCCTGGTTGACAAAATTTCCACTTTGACGGAGGAGGACATTTCAGTGATTAAAACCAATATTCAAGCCACCAATCAGAACAAGGCTCCTAGTCATTCCATCGGTTCATACGAGGTACTTGAACTTCTGGGATCTGGTGCATTTGGAAGTGTCTTTAAAATGTCAGTTCATAATCCTGCTCTTGGAAAGACGGCTAAAGATAGAGGAAAGAGTGTTGGTGAAATTGTTAATGAAACAGCTATCATGAAAGAACAGCTAAGACACCCAAATGTTGTCAAGTACCACAAAGCTTTTCAAGAAAAGGACAAACTCTTCGTCATAATGGAATTAGTCGAGGGCGCTCCTCTTGGCGAGCATTTTAATTCCTTGAAAGAAAAAGGGACCAAGTTTTCAGAGGAGAGAATATGGCATATCTTTATACAGATTGTTTTAGGACTTCGTTACATTCACAAAGAAAAACACATCGTCCACAGGGATCTTACGCCAAACAACATCATGCTGGGGGAAAATGATAAAGTCACTATAACTGATTTCGGTTTAGCCAAGCAGAAGAATCCTGATGCAAGTAAAATGACGTCGGTGGTTGGTACAATATTATATTCATGTCCTGAGGTTGTGCAAAGCAAGCCTTACGGTGAAAAGGCGGACGTGTGGGCCTCAGGCTGTATTTTGTATCAAATGGCAACTCTGCAACCTCCATTTTACTCGTCAAACATGTTAGCATTAGCAAAAAATATTGTAGAAGCTAAGTACAAGCCCATACCTCCAGGAGAGTACTCGGACAAGCTGTCCGAGACTGTGACCAGGTGTCTAACACCCAATCCTGATGAAAGACCAGATATAATTCAGGTTGCTGCCATTATCAGCGAAATAATGCTGGTGTATGTGGACAAGTTGCGGTCCAATGAGATCAGCCTGGAAAAGAAACTGGAACGAGAAAGAAAAAGAACCCAGAGGCATTATATCGAGGCAAATCGTAATATGCAGAACTACCATCGCCTTTTCTGGGCCTCACAAGAACGCTATGACAAGCTGGTGAACCTGTCAAGTAGTGGAGGAGCCGCTGGCCTCAGGAACGTTGACGTCCCTGAAGGTTCTGACACCGTCTTTGAGGCAGCGAGTGCCCTAGCAGAGTTCAACAAGAATGGCGTTCATAAAAACGGCGAAACAGAGTTTGCGAACCAAGTGGATTCTGGAATTGACATTGGAGGAGAAGCTCAAGCCAACGGAGTCCTGGGTTCCAGTATCAGATCACCTGAACAAAATGGTGGTACTAAACCTGAAAGTAGCTCGTCGCCAGGCTCAACGCGGCGGCAAAGGACTCTTAAGCCAGTTATTACTGATAAATCTAGTTACAAAGGGAATACTGAAAAATCGTCCTCTTTAAACAAAGACAAAGATAAGCCGTTATCGGGCGGTAGGGTAGGAATAGAAAAATTGTCCAACAGTAGGACTATCGTTGAGAAACCAGGCGCCAGTTCTTCCGCCACTAATTCTCATGTTTTTGCGGTACCGAAGCCCCCGGGACCACGGAAAGGCGCGAGGAGACAACTTCATATTGATTTCGCGGCCGGCAGCAAGGCTTCCCCGTCAAATGGTTCGAGTACTATAACAACAACACCTGTTGGCGGAAATTCATCTGGGATTCCTACTCCTGGGATAAGTGAATTTTCATCGAGAAGGACACACAGCAGCTCATCTGTGGAAACGTATAGAAGACAGAGTAGTGGACAGTTGAAGGCACGACCTCCTACTGCCGCAGCCACTCTCAGCATTTCTCCTCGCAAAGTGCGTCAAATAAACGATCCCATCTCCCAGATTCTCAACCAACTCCACAAGATCATCTTCATAACGCAGTTGCCACCTACATTATCACCAAACCCACAGAGAAGAATAGTCGAGCAGTTCAAGAGAGCTCTGTTTGCTCCTCAAAACAGCTCCTTCGTCAATCTTAAAAGCGAGGTCAAGAAGGTGATTGAAGGGTCTAGAGAAGTTATTGACCTGAAGTTCAGGTTTGGAGATCCAGCATTCCTGCATCACCAGCTAGATACCGCTGACAAGTTAGTGAGTGGAGTTAACCTTGAATCAGGCGACGCCCAAGAAATTGGCATAACGTACGAGATGATGCAGAATATAATCGAAAACGTTCTCATGGAGAGTGGCTATTATGACATGTCTCCTTGTGCAAGAAACCGAACGGTTCCTCTGGGTCCTATTGGCACGGTGCCGGCATCTGGTGTCAACTTAGGCCCCTCCAAGAGGGGTGGAACTTCCTAG

Transcript

rna-pdam_00017622

CATGAACCTATTCGAGTCGATCATTCAAGCCATAATTGTGGCATGAAAGTTGCATCATAGGTCACGCAACGCTCATGGAGAGTTGCGTGACATActaaaaaagaacaacttcGATCGAGACTAGCGTCTGCTTCAGATGCttataatattaaaaatagaCGTTAAGATGAAATaagaatttcttgaaaagtttgatgTTAAAGATGCTTGTGAATTTCTGGTTGTACCATTTTGATAGTTGTTCTCTCGCTAGATATTTTTGTAGACGTATTTGAGATTCGGTGATGTTGATGATGGACAGGTAGTGCTAAGTTTTCATACTGAACttcaacttaatttcaacCTTGTTATGCGACCAATTTCttacaattcattttttttaatttctgaaaaatccCCCTTTGCTGATGAaatattgatttcttttttcgctttttccCACGACACTAGTCAATCGGACAAGATCAATACTGACGTAATCTTTTTGAAGTACGGTAGTGCgtatttttagagaaaaatcaatatgCACCCTCCACTCTTCATagcttaattatttttctgctcAAGAAAGTGGCTATGTTTAATTATCAACTTCACAAGGTgtaattctgattggttgagattaCGCGCCATTGTCCCTTACCGTTGTTTGATTGGTCAAATTgtgacaatatttttattaagaaaTTGACGTTGCTTTGCTAATTTCACGAGCAAATTTTACGGAGCGAACCCGAAGTCGCTTGATGATGGAAAATGCCGACTGAAATCCCTGTTGTCTGGCGTATTTTTACGCTGCCAGGCCTAGGAGGCAATCGGTAGATGCGGTCGCTAAAGTTGTGGTTTTTGGTTTCGTGACCATGGCAAAAGAAACCCCAGGACTCTGCTAAACTCAAAATGCCTGTGGAGGAGAAGAGAGACAAGGCACAGACATCTACAGTGAATAGggagaatgaagaaaaagatttatcCAGATTGTTAGACCTGCTAAACACCCCAGCCAGCAAACAACAGCTTCCTTCCATCTCTTGGATCCCAGATGAAAATCAGAACACCACAGGTAATCCATGGGCTGGGCAGGCAAATGGAGTGTTACCCCATCAACACCAGTCAACTGAAGCTCTTGCTTTGGAGAAATTCAGCTCCAGGTACCAGGGAGTCAGGAATTTCAGTTCACATGCCCTCAGCAGTTACTTCAGCCAGATTTTCACAGCCCTTGTAAAGCAGCGAGTTTGCTACCTGGAGTGGATTGAACGAGTTCCTCCAGAAAATATTCTGAGAGTGCTAATATGCCTCAGAATGCTCATGAGGGACCACACATTTCAGgttgaatttttcaatctaGGTGGTGTGAAAGTCCTTGCagagAGGCTACAACTATTGACTGAAAGTTATCTTGAGAATGGAGAAGAGCCATTTACTGTTGACATtctgaaagaaatgacaaacaTTTGTCAGAAACTTGCTGCAGATGTTAAGCAGAGGGAGTGGCTTGTGGCATGTTGTACTCATAAGGCTCTTGTTCTTCTGTTATCTGCTAGTGATGTGATGGTTCTTCATTGTTCCTTGTACGCCCTGATTGGTTTGGCTCAAAGtgAGAGACCACGAGCTCTGATTGGTGAATTGAATTGCACAGAGATTCtattaagaatattacagGAATATGACATCCTTTCTAAAACTCTGGCAGCTGGTCTTCTGAGAATACTGTGTGCTGACAGCAGTATCAGAGAGCAGGTTAAGGTCTTTGATGGAATCCCAATTTGTCTGAGCTTGCTACATTGTGAAAATCTCAAGCTTCTGTGGAACGTGGTATGGATTATTGTACAACTGGCTGAAGATAGTGACTCAAGCAATGACATCAGAGTTCTTGGTGGAATTCCTTTACTTCTGGCACTTCTTCAAGATCGGAAGCCAGAGTCAAGTGCTGAAGTATTATATCTGGGCTCTGATACAACTTCAAAAGCATCAATCAGTGCAGAGACTGAGGCTGATTCTGGAGAAGATACCATGCCTTTGAAAATTGCTGTGTGCTCTGCCCTGACTGAGCTTGTTGTCAATGACACTAATGGACAGCAAATTGTGCAGTCAAACGGTATTTACTTGCTGGGATTACTTATTCTGCCCCAAGAAATGTCTTCTTCTGAGGAAGCCGCAACTGTAGAACACCTTCAGaaAAGCGCATTCAGGGCTTTGAGATTCTTGTTTAGTATGGAGCGAAATCGTCAACTCTTCAAGAGATTGTTTCCCCCAGACCTTTTCGAGAAATTTATTGATGTCGGTCATTACGTCAGGGAATTAAATGCCTACAAGTGCCTGGTTGACAAAATTTCCACTTTGACGGAGGAGGACATTTCAGTGATTAAAACCAATATTCAAGCCACCAATCAGAACAAGGCTCCTAGTCATTCCATCGGTTCATACGAGGTACTTGAACTTCTGGGATCTGGTGCATTTGGAAGTGTCTTTAAAatGTCAGTTCATAATCCTGCTCTTGGAAAGACGGCTAAAGATAGAGGAAAGAGTGTTGGTGAAATTGTTAATGAAACAGCTATCATGAAAGAACAGCTAAGACACCCAAATGTTGTCAAGTACCACAAAGCTTTTCAAGAAAAGGACAAACTCTTCGTCATAATGGAATTAGTCGAGGGCGCTCCTCTTGGCGAGCATTTTAAttccttgaaagaaaaagggacCAAGTTTTCAGAGGAGAGAATATGGCATATCTTTATACAGATTGTTTTAGGACTTCGTTAcattcacaaagaaaaacacatcGTCCACAGGGATCTTACGCCAAACAACATCATGCTGGGGGAAAATGATAAAGTCACTATAActGATTTCGGTTTAGCCAAGCAGAAGAATCCTGATGCAAGTAAAATGACGTCGGTGGTTGGTACAATATTATATTCATGTCCTGAGGTTGTGCAAAGCAAGCCTTACGGTGAAAAGGCGGACGTGTGGGCCTCAGGCTGTATTTTGTATCAAATGGCAACTCTGCAACCTCCATTTTACTCGTCAAACATGTTAGCATTAGCAAAAAATATTGTAGAAGCTAAGTACAAGCCCATACCTCCAGGAGAGTACTCGGACAAGCTGTCCGAGACTGTGACCAGGTGTCTAACACCCAATCCTGATGAAAGACCAGATATAATTCAGGTTGCTGCCATTATCAGCGAAATAATGCTGGTGTATGTGGACAAGTTGCGGTCCAATGAGATCAGCCTGGAAAAGAAACTGgaacgagaaagaaaaagaacccAGAGGCATTATATCGAGGCAAATCGTAATATGCAGAACTACCATCGCCTTTTCTGGGCCTCACAAGAACGCTATGACAAGCTGGTGAACCTGTCAAGTAGTGGAGGAGCCGCTGGCCTCAGGAACGTTGACGTCCCTGAAGGTTCTGACACCGTCTTTGAGGCAGCGAGTGCCCTAGCAGAGTTCAACAAGAATGGCGTTCATAAAAACGGCGAAACAGAGTTTGCGAACCAAGTGGATTCTGGAATTGACATTGGAGGAGAAGCTCAAGCCAACGGAGTCCTGGGTTCCAGTATCAGATCACCTGAACAAAATGGTGGTACTAAACCTGAAAGTAGCTCGTCGCCAGGCTCAACGCGGCGGCAAAGGACTCTTAAGCCAGTTATTACTGATAAATCTAGTTACAAAGGGAATACTGAAAAATCGTCCTctttaaacaaagacaaagataaGCCGTTATCGGGCGGTAGGGTAGGAATAGAAAAATTGTCCAACAGTAGGACTATCGTTGAGAAACCAGGCGCCAGTTCTTCCGCCACTAATTCTCATGTTTTTGCGGTACCGAAGCCCCCGGGACCACGGAAAGGCGCGAGGAGACAACTTCATATTGATTTCGCGGCCGGCAGCAAGGCTTCCCCGTCAAATGGTTCGAGTACTATAACAACAACACCTGTTGGCGGAAATTCATCTGGGATTCCTACTCCTGGGATAAGTGAATTTTCATCGAGAAGGACACACAGCAGCTCATCTGTGGAAACGTATAGAAGACAGAGTAGTGGACAGTTGAAGGCACGACCTCctACTGCCGCAGCCACTCTCAGCATTTCTCCTCGCAAAGTGCGTCAAATAAACGATCCCATCTCCCAGATTCTCAACCAACTCCACAAGATCATCTTCATAACGCAGTTGCCACCTACATTATCACCAAACCCACAGAGAAGAATAGTCGAGCAGTTCAAGAGAGCTCTGTTTGCTCCTCAAAACAGCTCCTTCGTCAATCTTAAAAGCGAGGTCAAGAAGGTGATTGAAGGGTCTAGAGAAGTTATTGACCTGAAGTTCAGGTTTGGAGATCCAGCATTCCTGCATCACCAGCTAGATACCGCTGACAAGTTAGTGAGTGGAGTTAACCTTGAATCAGGCGACGCCCAAGAAATTGGCATAACGTACGAGATGATGCAGAATATAATCGAAAACGTTCTCATGGAGAGTGGCTATTATGACATGTCTCCTTGTGCAAGAAACCGAACGGTTCCTCTGGGTCCTATTGGCACGGTGCCGGCATCTGGTGTCAACTTAGGCCCCTCCAAGAGGGGTGGAACTTCCTAGTGTCGTAGTGATAACAGCCACAATGGCAGCATGATATACACAGTCGTAACATCTGTTTTTAATGTGGAGTGTTAATGCTCGAAAATACGGTGTGGGATTTCTTTCAACATTCAGAGATGAATTGAAGCTTTCAGTGACAGTGGTTTTTTCTAAGCCATCTGGGATGGGAAACGAGATTCCTGTGGATGtaaatgtttgtaaaaaacgaacttaatttatttttttagcgaaagtttatttaaatgcAGTCgacgaaaaggaaaaagggagAGTTTATCTAGACTGCGCATGTAAGTAAGTGTTTTCATTGATGTGTACCAAGAATTTAGAGAAGACGAACTTTTTGTATAATTGAATAATCGACCGCGAATAAGCAGAGGCGTAATGTAGTTTTAATTAGGGATCCTAATTGGtggaaaattttacatcaCTGTCTCGACCAGTCAGATGAAAGGTTTAAGCTCATCGTGTCTGGTTTTCAGTGCAATGAATCAGCATCGAGAGGTGCTCGCGCAACTTGGTTATCTTTATCACCTACCTTGTGAAAGGATTCCTAATCAAATTTGATCGGCTGAGCGCGTTGCCGAGGAccaacattaattttgtttgtttggtgcGCAGTAATATCTTAGAACTAAAACAGTTCCCGATACTTCATGGTCGTGGAATTCAAATCCACGACCATAGGAAAGAGTTGCTCGAAGCTTCACAATGACACATGTTTGTTGTAAATGACGTATGTAAACGCTTCTCGTCAACTTCAGAAGTGGATTTAGCTTGAGCCAGCGTAGTTAATACCCTGGGGCACTGGAGGACCCTGGAGAAATGTAGTGCTGGGGGGTAGGGGATAGAGAACTGACTTTTTTCTCGACTTCCAGTGGCTTGCCGAGAGCTGAATTGTTTCTCAACTTCCAATAGCCTGCTGTGCAGGTATatttggtgaataattttaGGTTAGTGCTGTTAATTACACTTCTCACCACCCTGTTAAATCTCTTTAGAAAAGAATTAGCAGGGAAGAGAAGTTTTCTATCGCTTTCTTTTTCCATGAGAGTGAAGTATGCACACAATGTGAAGAATTACTATTGAGTGAAAAATTGCTAATCAAAATGCAGAGTTTGTGAACTTAGATTCTataagtcaaaattttaagatatttatgCATGGAGTGAATTAGAAttgaatttctattttttattttaaagacgAAATAAAAGCATTTGATCATGTCA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR050660 all species →	Family	NEK Serine/Threonine Protein Kinase	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43671 all species →	SERINE/THREONINE-PROTEIN KINASE NEK	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0043406 all species →	Biological Process	positive regulation of MAP kinase activity	Interproscan
GO:1902749 all species →	Biological Process	regulation of cell cycle G2/M phase transition	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20879	NEK10; serine/threonine-protein kinase Nek10	EC:2.7.11.1	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.