Gene detail

Detailed information of RMX51397.1 in Pocillopora damicornis

Genomic Location: SczhEnG_1800:33240...51100
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

pdam_00020807

ATGGAGAATTACCACGTGTTAGAGCTTATTGGAGAGGGCTCTTTTGGAAAAGTTTACAAAGGGCGCAAGAAATACAGTGGTCAGGTTGTTGCATTGAAATTCATTCCTAAAGTTGGCAGGTCGGAAAAAGAGCTGAAAAATTTACAGAGAGAAATTGACATTATGAGGAACTTAGAACATGAAAATATTATTAAGTTACTGGACTCCTTTGAAACACCCAAAGAGGTATGTGTTGTAACAGAGTATGCTGAGGGAGAATTATTCCAAGTATTGGAAGATGATGGTTCTCTTCCAGAGGAACAGGTGAGAAAGATTGCATGTCAGCTTGTGAAGGCCTTGTACTATCTACACTCTCATAGGATTCTTCACAGAGATATGAAACCTCAAAATATTCTTCTTGGAAAAGGTGGTGTGGTGAAACTGTGTGATTTTGGGTATGTAGGCAAGAATTCTTGTTCTATGGATATTCATACCATCATTGGACATTCACTGTCTCTGTCAGTTGGGTGTATTTTATATGAACTGTTTGTAGGAACGCCACCATTTTATACCAACAGTATATTTCAGCTTGTGAACCTTATCTGCCGGGACACTGTTAAATGGCCAGAGAATATGAGCCCTGATTTTCAGAGTTTTCTCCAAGGCCTTCTCACTAAAGAACCCAAAAAAAGGCTTTCATGGCCCTATTTACTCAGACATCCATTTGTAGCAGATGGAATAAATGAAGCTGAATTGGAAATATTTAGTGCTCCGGAGATGTTTGAGAAATTTGGAAATTCAGCAAGCAATGTCAATAAAACTGCTAAGACTAAAGGAAAAACTCAGGAAAGCAAGACAAAGAAAGAGGCTGGTACTGGGGAGGTACGTCCATCATGGATAAGAAAGCTTCAGCAACAGCAGGAAGGAACACAGCAAAATAAACAGAAAGGAAATGATCCAAAACAAGAAAACAAAGAAAAAGGGAGACAGGAATCAAAAAAGAAAGCACAGAGTAATATACCAAAGAAGAAAAAGCCTCCTTTAGTAAAGGAAACAGAAACAAAACCAGCGACAAGTTCTAAAGAGGCTAAAGAGAAGGTGAAAACTATGGAAGAAAAAGCTGTTGATGATGATTGGGAGGTGAAGCTGGATGACAGGCCTGTTACTACTGACAGAGTAGGACATGAAATCAGTGACGACTATGACAGAGAGGTATCAGTTATTGAACAAGTCTTAGCTGCGGCAGTGAAGAGAAGAGAGGAAAAGAGCAAGACTGGCCATGGAGGACAGGAGGAACTTGATAGTGAAGAAGAATGGGACTATCTTGTGGAACTGACCGACAAGATTGTGACAAGTAGTTCTCAAAAAGACAGCAGTGAAGAGGATGATAGGATTCCAGAGAAACTTATGACTGATGCAGCTTTTATCAGTAAAGTGCAGAGTTCACTAGAGACTGTGGCAGTACAAGTCTTAGATGGCCTGCTGGAGGGAGCATCTCGTTTTCGACAAATTTTGAGAGTGTTAAGAAGTTTGTTGATGACTGCTTGCCCACCAGAAGTTAAGTTCAAATTTTCAAGCTCACTTGGTATTCCTGAGGACAGTGTCACTCTCTTGGTACAGTTGCTTAGAAAATCTGGTCTTTCTCAGCAGCCATGGGCAGTCCAGGTTATTGTGGATTTGCTGAATTTGATGACAGTTTACCTTAGGAGCTGCATTCCTTTAGGCAGTGACTTCATGAAAGAAAGTTCAGCCATTTTGAGCTATGGAAAGCAACTTACGGGTGTTTTACCAACACTGATGCAGCATAGCCAGGACAAAGAACTCTCCTTACGACAGGCAGCCTTAGAGTGCGTTCAGTATCTATGTGAAATGATAGACAAGCACGATGATGCAGTAGCTGAAGAGTTCTACGACAATCTTATTACCTGTGATATAAAGAGCGTGGATTGCCTCATTTCTGCGCTTCATGGGGAACCAAGTGCCATACAAAGAGTTAAAGGTGCGATCAGTGATTCTCCATCTGCAAGGGCGACGATAATGCGCCCGCAAGTTGTTGCTTTAACGACGTTACTGGCTCTGGTGACCTCTTCAAAGACTACAAATAGCAAGTCCAACACAAAAGGAAACTTAGCCAGCTTTGTAGCAAAGAAATTAATTCACCCATCTAATGAAAACTGCATGGATTTTCTACACCAGTTTCTACACCACAAAGCCTCGTCTTTGTCAGTCTTGAACTTTCTTGCTGAACTTTGCATGGTGTCCAGGGACTTCAGTCTGCATCTTACAAGACAAGCAAAATGGATAGTTTCGTTAACAAAGTGTTTAACAAGCTGCAATGGAAAGGATGCCAATTGTAGAGAGACTTGTTCTGTTTTACAAATTTTGTGTTGCATGGTGACGAATGCAGAGAACATTCCTACCGAGATTTCCGATTGCGCAGACCACATTGTCTCCATTTTCACTGGGACAAGTGTGTTTACAATCCAAGTTCTGTCAGCCATGTTGCTTGCGAGACTGACCAGTTCAGATCCCAAATTGCAGTTTGATCAGAGTGAACATCTTATAGACGCCATCGCTACAGCTCTGACAGGAATTCCACCGGTCCCGTTGCAGAGTATATTGAAGTTTGTTGAACCTCCTACACATGCAGTCTCTTGTTTGATTAGAATGCTTACAACACCGTTCGCGGAGCAGCTATCTAAACATTTAGCTAGTTTTACGTATGAAAAGAAAGGAGATGAAGGAGATGTCCTTCAAGCTTTTATGAGAAAGTTGACATCGAGGAACATCTCCTTCACGATACACAAAGGACTGATCGCTAGGTTGGTTTTTAGTGATGAAATCTTTGTAACACAACTAGCAAGAGATATCACAAACCAAAAGGCTGAACCTTTCCTAACTTCACTGGTGTCAGCAGATAACTCTGTTACTCTCTTGAATGACGTCATTACGATTTTGAGTCATGTATCTCGAAGTTCTTCTGAGTATGTTGCCATGGTTACAAGAGTCTTGCAAGGTGATCGAGAATCATACGAGCCCCTGTACAATCTACTCACACACACGAGTTCGGCTGTCAGTGCCAACGCCTGTGGCATGCTGGGTAATATACTGAAGCACTCTGCCGTTTTTTATCCTGTTCTTCAAAGAACGAATTTGTTGTCAACTTTGATCAGCTGTCTGAAGAGTGATGACGCCAATGTTCGAAAGGCCGCCACTTTTGCTTTGGGAAACGCAGCGTATCATAGCGACTCACTGTACAAAGCACTGACACCAGCTGTACCTCTTTTGGTTGACTCACTAACAGACTCGGTGGCGAGAACACGAGCTAATGCAGCAGGCGCTTTAGGTAATTTGGTGAGACATTCGCCGTTGCTCTATCAGCAGTTAATCAAGGCACAAGCACCACATGGTGTTCTCGACATGGCCTGCAATGACGGACACGCTGAGCCTCAGGATGCAGCTTTGAAGACTCTAAGACTTTTCTGCAGAAATCCTCGGTGCAGACAGGTCCTTGTATCTCTTGGAATTCAACAACGGCTCCTCAGGTTCCTGGAAAGATCCCGGATGTCTGGAGCCTGCAGTCAGCAATCCAGCGTTTCTTCAGTTCCCAGTACTGCGCGGACTAATGATAGTGTGGTATCTGAACATTGTGTTCGCATACTGAACAAGCTTAAAACACGAGGAAGTGACGCTTAA

Transcript

rna-pdam_00020807

ATGGAGAATTACCACGTGTTAGAGCTTATTGGAGAGGGCTCTTTTGGAAAAGTTTACAAAGGGCGCAAGAAATACAGTGGTCAGGTTGTTGCATTGAAATTCATTCCTAAAGTTGGCAGGTCGGAAAAAgagctgaaaaatttacagagaGAAATTGACATTATGAGGAACTTagaacatgaaaatattattaagtTACTGGACTCCTTTGAAACACCCAAAGAGGTATGTGTTGTAACAGAGTATGCTGAGGGAGAATTATTCCAAGTATTGGAAGATGATGGTTCTCTTCCAGAGGAACAGgtgagAAAGATTGCATGTCAGCTTGTGAAGGCCTTGTACTATCTACACTCTCATAGGATTCTTCACAGAGATATGAAACctcaaaatattcttcttGGAAAAGGTGGTGTGGTGAAACTGTGTGATTTTGGGTATGTAGGCAAGAATTCTTGTTCTATGGATATTCATACCATCATTGGACATTCACTGTCTCTGTCAGTTGGGTGTATTTTATATGAACTGTTTGTAGGAACGCCACCATTTTATACCAACAGTATATTTCAGCTTGTGAACCTTATCTGCCGGGACACTGTTAAATGGCCAGAGAATATGAGCCCTGATTTTCAGagttttctcCAAGGCCTTCTCACTAAAGAACccaaaaaaaggctttcatGGCCCTATTTACTCAGACATCCATTTGTAGCAGATGGAATAAATGAAGCTGAATTGGAAATATTTAGTGCTCCGGAGATGTTtgagaaatttggaaattcaGCAAGCAATGTCAATAAAACTGCTAAGACTAAAGGAAAAACTCAGGAAAGCAAGACAAAGAAAGAGGCTGGTACTGGGGAGGTACGTCCATCATGGATAAGAAAGCTTCAGCAACAGCAGGAAGGAACACagcaaaataaacagaaaggaaatgatccaaaacaagaaaacaaagaaaaagggagacaggaatcaaaaaagaaagcacAGAGTAATAtaccaaagaagaaaaagcctCCTTTAGtaaaggaaacagaaacaaaaccagCGACAAGTTCTAAAGAGGCTAAAGAGAAGGTGAAAACTATGGAAGAAAAAGCTGTTGATGATGATTGGGAGGTGAAGCTGGATGACAGGCCTGTTACTACTGACAGAGTAGGACATGAAATCAGTGACGACTATGACAGAGAGGTATCAGTTATTGAACAAGTCTTAGCTGCGGCAGTGAagagaagagaggaaaagagCAAGACTGGCCATGGAGGACAGGAGGAACTTGATAGTGAAGAAGAATGGGACTATCTTGTGGAACTGACCGACAAGATTGTGACAAGTAGTTCTCAAAAAGACAGCAGTGAAGAGGATGATAGGATTCCAGAGAAACTTATGACTGATGCAGCTTTTATCAGTAAAGTGCAGAGTTCACTAGAGACTGTGGCAGTACAAGTCTTAGATGGCCTGCTGGAGGGAGCATCTCGTTTTCGACAAATTTTGAGAGTGTTAAGAAGTTTGTTGATGACTGCTTGccCACCAGAAGttaagttcaaattttcaagctCACTTGGTATTCCTGAGGACAGTGTCACTCTCTTGGTACAGTTGCTTAGAAAATCTGGTCTTTCTCAGCAGCCATGGGCAGTCCAGGTTATTGTGGATTTGCTGAATTTGATGACAGTTTACCTTAGGAGCTGCATTCCTTTAGGCAGTGACTTCATGAAAGAAAGTTCAGCCATTTTGAGCTATGGAAAGCAACTTACGGGTGTTTTACCAACACTGATGCAGCATAGCCAGGACAAAGAACTCTCCTTACGACAGGCAGCCTTAGAGTGCGTTCAGTATCTATGTGAAATGATAGACAAGCACGATGATGCAGTAGCTGAAGAGTTCTACGACAATCTTATTACCTGTGATATAAAGAGCGTGGATTGCCTCATTTCTGCGCTTCATGGGGAACCAAGTGCCATACAAAGAGTTAAAGGTGCGATCAGTGATTCTCCATCTGCAAGGGCGACGATAATGCGCCCGCAAGTTGTTGCTTTAACGACGTTACTGGCTCTGGTGACCtcttcaaagactacaaataGCAAGTCCAACACAAAAGGAAACTTAGCCAGCTTTGtagcaaagaaattaattcacCCATCTAATGAAAACTGCATGGATTTTCTACACCAGTTTCTACACCACAAAGCCTCGTCTTTGTCAGTCTTGAACTTTCTTGCTGAACTTTGCATGGTGTCCAGGGACTTCAGTCTGCATCTTACAAGACAAGCAAAATGGATAGTTTCGTTAACAAAGTGTTTAACAAGCTGCAATGGAAAGGATGCCAATTGTAGAGAGACTTGTTctgttttacaaattttgtGTTGCATGGTGACGAATGCAGAGAACATTCCTACCGAGATTTCCGATTGCGCAGACCACATTGTCTCCATTTTCACTGGGACAAGTGTGTTTACAATCCAAGTTCTGTCAGCCATGTTGCTTGCGAGACTGACCAGTTCAGATCCCAAATTGCAGTTTGATCAGAGTGAACATCTTATAGACGCCATCGCTACAGCTCTGACAGGAATTCCACCGgTCCCGTTGCAGAGTATATTGAAGTTTGTTGAACCTCCTACACATGCAGTCTCTTGTTTGATTAGAATGCTTACAACACCGTTCGCGGAGCAGCTATCTAAACATTTAGCTAGTTTTACgtatgaaaagaaaggagatGAAGGAGATGTCCTTCAAGCTTTTATGAGAAAGTTGACATCGAGGAACATCTCCTTCACGATACACAAAGGACTGATCGCTAGGTTGGTTTTTAGTGATGAAATCTTTGTAACACAACTAGCAAGAGATATCACAAACCAAAAGgCTGAACCTTTCCTAACTTCACTGGTGTCAGCAGATAACTCTGTTACTCTCTTGAATGACGTCATTACGATTTTGAGTCATGTATCTCGAAGTTCTTCTGAGTATGTTGCCATGGTTACAAGAGTCTTGCAAGGTGATCGAGAATCATACGAGCCCCTGTACAATCTACTCACACACACGAGTTCGGCTGTCAGTGCCAACGCCTGTGGCATGCTGGGTAATATACTGAAGCACTCTGCCGTTTTTTATCCTGTTCTTCAAAGAACGAATTTGTTGTCAACTTTGATCAGCTGTCTGAAGAGTGATGACGCCAATGTTCGAAAGGCCGCCACTTTTGCTTTGGGAAACGCAGCGTATCATAGCGACTCACTGTACAAAGCACTGACACCAGCTGTACCTCTTTTGGTTGACTCACTAACAGACTCGGTGGCGAGAACACGAGCTAATGCAGCAGGCGCTTTAGGTAATTTGGTGAGACATTCGCCGTTGCTCTATCAGCAGTTAATCAAGGCACAAGCACCACATGGTGTTCTCGACATGGCCTGCAATGACGGACACGCTGAGCCTCAGGATGCAGCTTTGAAGACTCTAAGACTTTTCTGCAGAAATCCTCGGTGCAGACAGGTCCTTGTATCTCTTGGAATTCAACAACGGCTCCTCAGGTTCCTGGAAAGATCCCGGATGTCTGGAGCCTGCAGTCAGCAATCCAGCGTTTCTTCAGTTCCCAGTACTGCGCGGACTAATGATAGTGTGGTATCTGAACATTGTGTTCGCATACTGAACAAGCTTAAAACACGAGGAAGTGACGCTTAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR021133 all species →	Repeat	HEAT, type 2	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22983 all species →	PROTEIN KINASE RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007228 all species →	Biological Process	obsolete positive regulation of hh target transcription factor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for RMX51397.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.