Detailed information of RMX52849.1 in Pocillopora damicornis

Genomic Location: SczhEnG_1564:30297...56413
NR annotation: no NCBI-NR hit recorded
Species abbreviation PDAMI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00749
all species →
tRNA-synt_1ctRNA synthetases class I (E and Q), catalytic domainDomainInterproscan
PF03129
all species →
HGTP_anticodonAnticodon binding domainDomainInterproscan
PF00458
all species →
WHEP-TRSWHEP-TRS domainDomainInterproscan
PF09180
all species →
ProRS-C_1Prolyl-tRNA synthetase, C-terminalDomainInterproscan
PF00587
all species →
tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF03950
all species →
tRNA-synt_1c_CtRNA synthetases class I (E and Q), anti-codon binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004499
all species →
FamilyProline-tRNA ligase, class IIa, archaeal-typeInterproscan
IPR004526
all species →
FamilyGlutamyl-tRNA synthetase, archaeal/eukaryotic cytosolicInterproscan
IPR011035
all species →
Homologous_superfamilyLarge ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyInterproscan
IPR020058
all species →
DomainGlutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domainInterproscan
IPR036621
all species →
Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR045864
all species →
Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR004154
all species →
DomainAnticodon-bindingInterproscan
IPR000738
all species →
DomainWHEP-TRS domainInterproscan
IPR014729
all species →
Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR020056
all species →
Homologous_superfamilyLarge ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalInterproscan
IPR020061
all species →
Homologous_superfamilyGlutamine-tRNA ligase, alpha-bundle domain superfamilyInterproscan
IPR000924
all species →
FamilyGlutamyl/glutaminyl-tRNA synthetaseInterproscan
IPR016061
all species →
DomainProline-tRNA ligase, class II, C-terminalInterproscan
IPR017449
all species →
Homologous_superfamilyProlyl-tRNA synthetase, class IIInterproscan
IPR002314
all species →
DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR009068
all species →
Homologous_superfamilyuS15/NS1, RNA-binding domain superfamilyInterproscan
IPR006195
all species →
DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR020059
all species →
DomainGlutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domainInterproscan
IPR001412
all species →
Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43382
all species →
PROLYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004827
all species →
Molecular Functionproline-tRNA ligase activityInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0006433
all species →
Biological Processprolyl-tRNA aminoacylationInterproscan
GO:0017101
all species →
Cellular Componentaminoacyl-tRNA synthetase multienzyme complexInterproscan
GO:0000166
all species →
Molecular Functionnucleotide bindingInterproscan
GO:0004818
all species →
Molecular Functionglutamate-tRNA ligase activityInterproscan
GO:0006424
all species →
Biological Processglutamyl-tRNA aminoacylationInterproscan
GO:0006412
all species →
Biological ProcesstranslationInterproscan
GO:0004812
all species →
Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0043039
all species →
Biological ProcesstRNA aminoacylationInterproscan
GO:0006418
all species →
Biological ProcesstRNA aminoacylation for protein translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14163EPRS; bifunctional glutamyl/prolyl-tRNA synthetaseEC:6.1.1.17
EC:6.1.1.15
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP