Gene detail

Detailed information of RMX52943.1 in Pocillopora damicornis

Genomic Location: SczhEnG_1558:10513...23605
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12053 all species →	Par3_HAL_N_term	N-terminal of Par3 and HAL proteins	Family	Interproscan
PF00221 all species →	Lyase_aromatic	Aromatic amino acid lyase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001106 all species →	Family	Aromatic amino acid lyase	Interproscan
IPR024083 all species →	Homologous_superfamily	Fumarase/histidase, N-terminal	Interproscan
IPR021922 all species →	Domain	Par3/HAL, N-terminal	Interproscan
IPR008948 all species →	Homologous_superfamily	L-Aspartase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10362 all species →	HISTIDINE AMMONIA-LYASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004397 all species →	Molecular Function	histidine ammonia-lyase activity	Interproscan
GO:0006548 all species →	Biological Process	L-histidine catabolic process	Interproscan
GO:0016841 all species →	Molecular Function	ammonia-lyase activity	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for RMX52943.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.