Gene detail

Detailed information of RMX53152.1 in Pocillopora damicornis

Genomic Location: SczhEnG_1510:24601...35809
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

pdam_00015468

ATGGTTATCCGGAAATCAGACATTATGGACGATGGAGATATTGTAAAAGAAGGACATCTTCGGAGACTGAAGACGCTGAAAAAGCGATTTTTCGTTCTTCGTTCGTCGCCAAGAAAAGGCAAATCCCGACTAGAATACTTCGAGAGCGAGAAGAAATTCCGCTCAAAAGGCCCACCAAAGCGAGTGATCTACCTAGCAAGCTGCCTAAACATCGCAAAGAAAGAGGACTCTAAGCACAAATTGGTGTTTGCTCTGTACACACGGGAAGATGTTTTTGGCTTAATCGCGGAATCGGAGGACGAATTGAACGCTTGGATGAAAATAATGAACATAGAGAAGAGAAAAGATGAGATCTTTAATGCATCTGTATCAACCTGGCCTGTCGCTGTGAAACCAAGGGGATTGGGAACTAGCAAGAACCTAGCTGGTCTGTATGACCTTCAGTTATCAACTCGCAACTTAGCACTGGTTAAAAAGGACACCAAAGAACCAGCCATAGAGGTGCAGCTGGTCAATATTAGACGCTGTGGCCATACAGACTGTTTTTTCTTTATGGAGCTTGGGAGGTCTGCAGCCACTGGGGCTGGTGAGCTGTGGATCCAGGTTGATGATCAAGTTATTGCACAGAACATGCATGAAGCTATATTGAGCGCCATGCACAACATCTCCTCATCTGATATTCCACCAGTCACTAGGCGACGTTGTGATAGTGAAGGAAAACGTGGAAAGTCTCGACCTCGTCCAGTGTCAGCTCTCATGTATCCACCCAGTCGTGGTCGTTCAGACACCGAGCCAACTTCTCAGAATCCGTTGGTTCGTACTGTGAGCTCCTCAGTTTCAACTCGGAACTTAACAGAGTTTGAAAGTCCCAAGAACAAAACGTCATCTGTGTTGAATCGCTTGCGGCCGCGGAGAAGGTCAAAGGAAGGTTTGAATATGAGCTCGGAAAGTCAAGTCAAGAACCAAGAAGAAAAAAATCCAGACTTCAGTGACAAAGTATTGATGCGCCCCCCGTCAAAACCACTAGAACAGAAAGATGACCAACCGGAGTACATGAATCTTGGATCGAAAAATGTAGGAGAAACATCGAGCATGCAGGATTACATGGCGATGAATGGGGTAACTGGAGGCCGCAAAAATAGTGATTCCTACGTGGATATGGAGGCAACGAAGTCGAAGGCTGTGAAAGCATTTAAGATCGTCGACAATGAACAGCTGAACAAAAAAACGACACACACAGCCCCCGATGGGGGCTACATGGACATGACGTCACTAAGAAAACAACACAGTGACAAACAAAACGGGACTGCGAAGAGTCAAAGCTCGAGCCCGCGGGCTGGGTTTGTACAGCAGTCCAAATCGTCGTCTCCCAGGCAGCTGAGAACCACAGAAAGTGCGTTGCCAAACAAACCAGACATTCGTGAATTCGTTGCCATCAAAATGTCTCCATCCTCTTCCCGCAGAAGATCAAGCCAGGATTATGTTTCGATGTGTCCCCTCGCTGTAGAATCAGGCGAATCTCCTAGTTATGTAAATTTTTCGCCCGGGATGAACTCTCCGAGGTCGCGGTCTCCGAAACCCAATGTGAGACAACGTAAAGAGGACTCGAACGGTTATTACGTAAACTTTACCCCTGGGGAAGAATTTTCAAACAGGGGGAAATATCTAGAAATTCCGACTTCACTAAAACGTCTCAACAACTCAGGTGATTCATCTTCGTATGAAGATATGCACAGTTACGTTAACTTTAGTCCCGGAAAGATCACTGATGACAAGAACTCGAACAACAGTTTTAAGAAGCATAGCCTGGAGTCTGTCTTATTGGACAAACCTCGCGCGTACGAAAACATTGATCTCAGAGGTATTACAAAAAGCAAAAGCGCAGTAGATGTGCCCGAGTACGTAAACTTTGTTCCAGGGGATATCTGCGAAAGTAGCATAAATGACGTTTTCTCAGTCAATGACGATCCGGACACCGGCCTAGTTAAGGCCCAAGAGTATGACGAGTTTTCTCCTGGAAAGATTCAAGTTGAAGGACAAAGATGGAGAAAATCACCTTGTTCTTACAGAAGAGACAGTGAACCAGCCAGAATACAGACGCCAAAGTTTGTGACTATCGCACCACTAGACACAACTCAAGAAGATGAGGAAATTAAGCAGCTTAATTACGTCATGCTCGACTTAAGCAATCCCGACAACTCTTCTGAGTCTCCAAGTCGTCAGCGCCGACGACCTCCGAACATAGACTTAAGCTCGTGTCAGCGCGGGTCGCCAGGGCCAAAATCTGCTCCCGTCAGAAGTGCGTACGCTGAGGTGGACTTCACTAAATCTGATGGGATAAGGCAAGCTAGGCAGGAGAGAAGGGAATCAGCTTACGCTCTTGTCATCAACTAA

Transcript

rna-pdam_00015468

CTGAGGAATAAATTCTTTCTCGTTTTAAGACCGTTGTTATCACATCGGATCACGAAATATTATCACGCTACGCACTCTCTCATATCGCTTCCCACACCACTTGGTGGAGACTGGTACCGATTTGCCACAAGAGAGATAACACTTGAGTCGTAAAAATGCAATGGGGTTTCACAAAGACttctttttcagataattGCCTTTCAAGCACTTTTGTCCAACTCTAAGAAGAACAACTTTATTATGAAGCATGACAAATACTAGATCGAAAATGACATCTAGTGCCTGGGGGTGACGTTGCTACGAGCGAACCAGTTGGAAATCTTCGAAATCCTCGAAATCTTACCATTTATTTGGAGCGCGCGAAGTGTCGTCAAAGTCCAAGGGCACAAGGATACTTTTTGGAATCTGGCGATCGCTTTCTATGGTTATCCGGAAATCAGACATTATGGACGATGGAGATATTGTAAAAGAAGGACATCTTCGGAGACTGAAGaCGCTGAAAAAGCGATTTTTCGTTCTTCGTTCGTCGCCAAGAAAAGGCAAATCCCGACTAGAATACTTCGAGAGCGAGAAGAAATTCCGCTCAAAAGGCCCACCAAAGCGAGTGATCTACCTAGCAAGCTGCCTAAACATCGCAAAGAAAGAGGACTCTAAGCACAAATTGGTGTTTGCTCTGTACACACGGGAAGATGTTTTTGGCTTAATCGCGGAATCGGAGGACGAATTGAACGCTtggatgaaaataatgaacatagagaagagaaaagatgAGATCTTTAATGCATCTGTATCAACCTGGCCTGTCGCTGTGAAACCAAGGGGATTGGGAACTAGCAAGAACCTAGCTGGTCTGTATGACCTTCAGTTATCAACTCGCAACTTAGCACTGGTTAAAAAGGACACCAAAGAACCAGCCATAGAGGTGCAGCTGGTCAATATTAGACGCTGTGGCCATACagactgttttttctttatggaGCTTGGGAGGTCTGCAGCCACTGGGGCTGGTGAGCTGTGGATCCAGGTTGATGATCAAGTTATTGCACAGAACATGCATGAAGCTATATTGagCGCCATGCACAACATCTCCTCATCTGATATTCCACCAGTCACTAGGCGACGTTGTGATAGTGAAGGAAAACGTGGAAAGTCTCGACCTCGTCCAGTGTCAGCTCTCATGTATCCACCCAGTCGTGGTCGTTCAGACACCGAGCCAACTTCTCAGAATCCGTTGGTTCGTACTGTGAGCTCCTCAGTTTCAACTCGGAACTTAACAGAGTTTGAAAGTCCCAAGAACAAAACGTCATCTGTGTTGAATCGCTTGCGGCCGCGGAGAAGGTCAAAGGAAGGTTTGAATATGAGCTCGGAAAGTCAAGTCAAgaaccaagaagaaaaaaatccagacTTCAGTGACAAAGTATTGATGCGCCCCCCGTCAAAACCACTAGAACAGAAAGATGACCAACCGGAGTACATGAATCTTGGATCGAAAAATGTAGGAGAAACATCGAGCATGCAGGATTACATGGCGATGAATGGGGTAACTGGAGGCcgcAAAAATAGTGATTCCTACGTGGATATGGAGGCAACGAAGTCGAAGGCTGTGAAAGCATTTAAGATCGTCGACAATGAACAGCTGAACAAAAAAACGACACACACAGCCCCCGATGGGGGCTACATGGACATGACGTCactaagaaaacaacacagtGACAAACAAAACGGGACTGCGAAGAGTCAAAGCTCGAGCCCGCGGGCTGGGTTTGTACAGCAGTCCAAATCGTCGTCTCCCAGGCAGCTGAGAACCACAGAAAGTGCGTTGCCAAACAAACCAGACATTCGTGAATTCGTTGCCATCAAAATGTCTCCATCCTCTTCCCGCAGAAGATCAAGCCAGGATTATGTTTCGATGTGTCCCCTCGCTGTAGAATCAGGCGAATCTCCtagttatgtaaatttttcgcCCGGGATGAACTCTCCGAGGTCGCGGTCTCCGAAACCCAATGTGAGACAACGTAAAGAGGACTCGAACGGTTATTACGTAAACTTTACCCCTGGggaagaattttcaaacaggGGGAAATATCTAGAAATTCCGACTTCACTAAAACGTCTCAACAACTCAGGTGATTCATCTTCGTATGAAGATATGCACAGTTACGTTAACTTTAGTCCCGGAAAGATCACTGATGACAAGAACTCGAACAACAGTTTTAAGAAGCATAGCCTGGAGTCTGTCTTATTGGACAAACCTCGCGCGTACGAAAACATTGATCTCAGAGGTattacaaaaagcaaaagcgCAGTAGATGTGCCCGAGTACGTAAACTTTGTTCCAGGGGATATCTGCGAAAGTAGCATAAATGACGTTTTCTCAGTCAATGACGATCCGGACACCGGCCTAGTTAAGGCCCAAGAGTATGACGAGTTTTCTCCTGGAAAGATTCAAGTTGAAGGACAAAGATGGAGAAAATCACCTTGTTCTTACAGAAGAGACAGTGAACCAGCCAGAATACAGACGCCAAAGTTTGTGACTATCGCACCACTAGACACAACTCAAGAAGATGAGGAAATTAAGCAGCTTAATTACGTCATGCTCGACTTAAGCAATCCCGACAACTCTTCTGAGTCTCCAAGTCGTCAGCGCCGACGACCTCCGAACATAGACTTAAGCTCGTGTCAGCGCGGGTCGCCAGGGCCAAAATCTGCTCCCGTCAGAAGTGCGTACGCTGAGGTGGACTTCACTAAATCTGATGGGATAAGGCAAGCTAGGCAGGAGAGAAGGGAATCAGCTTACGCTCTTGTCATCAACTAAGCAGAAGACGAGAGCGGACGAAAGTAGGTACTTCGTGATTCAAACTATTTGTTGAACCGTCGATGTGGCAAGCGTATTTACCTGCATCGTTATATAAACGATTGGGGACTGAGAAGAAGCTCTATTTACTGCTAGATCACAGAAGCGAAGTGaagtacatgaaaaaaattcatgtttggATGAGCATGTAGAGATTCACTTTGGTGGGATTGTCCAAGGTAACTATTTCCTAAGAAGAAACATTTCCAATTAAGACATGATTTCTTGTGGCTGCTCATTCCGGAAACTTTGTagctgaaaattaaattagttcttaacttttgaaaaatagatCAGTAGGTCTGTGGCAAGTGACAAACAGAATATGAGGTGTACCAAGTTTAGCCTGAACCACATCTTTTGAACGAGGGCTGATTGAAAATTGATAGCATagaagaaatttcattgaaaatgttttgtttaggATCTTTTCAATTAGTTTTGTAAAAGGCGATGTTGCACGAGCAGATTTGTATCATTGTTGCAGCTTAATGTcgcagaaaatttttttatttcgttagAAATCTCGTGAAACGTCTCTCAGTCTACTTTTGATTCCAAGAACGAGATCGTATTCGGCGATTGCTCGGGGATCCGAAAACAATCGTGTTTCTTGACGAGAATTGGCCGAGGGTCGCTCCTCTCATGGTTGGCCAATCGATATTAACTGGTTGGAAAATATTAGGATAGAATTgatttaacaatatttttctatttaaggCAGTGATCATTCGCTAGCGATTGCGATGCATGAGGAAATAGttctatgattttttttagcccaggattttgatattttttattacttcgGCTTTATTGTGACCAATGTTAGAAGTGATAACTGAAAGGGAAGGCCTGTTAATGTGTAAGATAAAAAAGTGCTGCAGGTTTTGTTGGGAGCTCCCTAACTGCGTATTAGTTTGGCGTCCGAATGAAGACCGAGATTGCTCAACCCGGTACAAGGTCCCTAAGAGGGCAAGTTGTTCTTTATCGGAATGCCATTAAACGTTGTGTCCAGTCACGTCCACGAAACCAAGAAATCTGTCGGGTTTACTTACCACTTacttaaagaataaaattgaaccaa

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02174 all species →	IRS	PTB domain (IRS-1 type)	Domain	Interproscan
PF00169 all species →	PH	PH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR039011 all species →	Family	Insulin receptor substrate	Interproscan
IPR002404 all species →	Domain	IRS-type PTB domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10614 all species →	INSULIN RECEPTOR SUBSTRATE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005158 all species →	Molecular Function	insulin receptor binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0008286 all species →	Biological Process	insulin receptor signaling pathway	Interproscan
GO:0043548 all species →	Molecular Function	phosphatidylinositol 3-kinase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16172	IRS1; insulin receptor substrate 1	-	Insulin resistance	ko04931	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.