Detailed information of RMX53529.1 in Pocillopora damicornis

Genomic Location: SczhEnG_1422:578375...582183
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01423
all species →		LSMLSM domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047575
all species →		DomainSm domainInterproscan
IPR016487
all species →		FamilySm-like protein Lsm6/SmFInterproscan
IPR001163
all species →		DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR010920
all species →		Homologous_superfamilyLSM domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11021
all species →		SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-FInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000932
all species →		Cellular ComponentP-bodyInterproscan
GO:0005688
all species →		Cellular ComponentU6 snRNPInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0005732
all species →		Cellular Componentsno(s)RNA-containing ribonucleoprotein complexInterproscan
GO:0030490
all species →		Biological Processmaturation of SSU-rRNAInterproscan
GO:0046540
all species →		Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for RMX53529.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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