Gene detail

Detailed information of RMX53541.1 in Pocillopora damicornis

Genomic Location: SczhEnG_1422:483498...488344
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-pdam_00004390

CTGCCATGGAGCCTGATCAATAGTTGATGGCATTCTCTTGACTTTTGTGCTTGTtgatgaatatattttttactttttttgcgATTTGTTCGTATCAAGAACCCGTGATCAAAGGTTAAAAGGAACTTGAAATATCTTTAACCTGAGATGGACATTACGAAAGAAGTGGAAAGCGCATTGGAAGAAGAAGGTTACGTTAAAATCGACTCGACTTCCTCGAGCACCATGTCCACCTCTACTTCTCCTGTTTCCATTGGGGATAAAAAATCGAGTTCACGTGGCGTCACTTCGGTTCATTCGCACTCGGTGACCCAAATAACGAGCCCCGTTCAGCAGAAGATTCGCACGGACGTTTCAGCAAGTGATCTCTTGGAAAATAAGAGTGGTAAATCATCTCCAAATTCATCATCGACGTGGCAAGGCCAGGGGCAAACTTCTGACCAGGATGGCGATGGGAATGATGACTTAACTAGCGGGGTTTGGGGCTGGATGTCCACTGCAATGTCGGTTGGATTACAAACAACGCAAAACATTGGTAGAAATATTATGGAGAAAACCAAGaCTTCAGTTGAAAGTGTGATCACAACACTTGACCCAGAAATGGAGGACTACTTATCAGACAGGAGAGAACAGTCTATAAGCCTGGCTGTTGCAACCACTGATACTGAAGCCATAGAAGCAATAAAGGATGGGTTCCGTCAAGTGTTTGAACATGTTACCATGCAGTCAAATTCCTCGACATCTGGGATTGCTCCCCTTCCTGTAGGATTTTCAGCTGGGGTGAAGGGAGCACAGCATAGAATAGCCAGTTTAGTGCGTGGAAAGAAAGTGCAGGAAGGTCAAGTGATCATTGGAGTGGAAGAAATGTTGTCAGAGCTGTTACCTGGCAAgTGGTTTGGTTTAACATGTCTTGCACTGAGTGACCCAACTTCAAAGACAGAGCTTGAAACATTCTCTCAATCAGTCCAAATTCCAAGTTTTTATATCAAGAAAGCAGAGGAAAGCACACCATCCAATTACAACCTAAGATGGTCAGGGCTATCATTTACTCTTGGGGAGGTTATGCTTGGCTCTGGGCAAGAGTATGGCGATTGGCATTCTAAAATATCAGgtTCTTCCAAAAGACAAATTCTTACTTTAGCTGCAAGGAGTTTAGCAGGGCAGTTTAGAGAAAGATTGAGAGCTAGTGCTGACTCATTGATGGAGAATGCATTAGTTATGTAACAAGTTGATACTAACTAATAGgtcacagatgatgtcaacaGTGGCACATGAGGCGCAGTCAAGTCTGTCTCATTGTGATGTCTTCTATGATCCATTACAGACTGTACAGAGCCATGGCaaaatggaatctatttgttttatgacTGATAAggaagcaaaatgttgttattggTGACGTCATTTCTGTGTGTCTTCCAATATATTATGAGTGGGAACCATTCAAAATGTGTGTACAGTTCAGCTGAACATATATTAATACCCTGTACAAGATTTAGTCACCCATTGCACTTCACCATAGTAAAGAATCACAACTTATCTGTTAAACATtcatagtaataataatgCCTTATTACTCCTGGCAATTTATTTATGTGTAATTAGGGTCCATAGCTTTGAGGGTACTTTAGTTTCCTCCCTTGCACCAAGATATTCGAAGGAAATTACATTGTGCACCTCTTGAGAATTTGAGAATTGTATTTAATGCAAGAGTATAATtaatagttattttaaattactatCTGCTGagtgttaaaaatgttaagtTAAGAGTTTATTGGAGCTAGCCTAATGATCAGATAACTTATGGCTATTTGAATAGATCAgatgtaaaatatattttaattgaatctaaaataaaatgcattgaAGAAGCAATAAAAGACCTTACTAAGggggaaaacagatttgaaaacaaacaaagttggTGTGAAATAATGTACTATTTTCCATGTTCTTTATTTCCAGGGGttattttccatacatttttGAAGTATAAGTGTTAAACTTTCATTAATGTTTATGTCAGCAATCGTGGGCAGAAGGCATAGGGGATTTAATTATTATAcacatgattatttttttgtgaaaaacaaagcgtttttctctgtttatgGTTGGGACTTCACTGTCTTATTTTTTATGCCAAGaagcaaataacaaataaatgctGCATGACCAATTTATGGctggttttgaa

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01931 all species →	NTPase_I-T	Protein of unknown function DUF84	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029001 all species →	Homologous_superfamily	Inosine triphosphate pyrophosphatase-like	Interproscan
IPR026533 all species →	Domain	Non-canonical purine NTP phosphatase/PRRC1	Interproscan
IPR026534 all species →	Family	Protein PRRC1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23276 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0034199 all species →	Biological Process	activation of protein kinase A activity	Interproscan
GO:0034237 all species →	Molecular Function	protein kinase A regulatory subunit binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for RMX53541.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.