Gene detail

Detailed information of RMX53643.1 in Pocillopora damicornis

Genomic Location: SczhEnG_1415:342415...345709
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12838 all species →	Fer4_7	4Fe-4S dicluster domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017896 all species →	Domain	4Fe-4S ferredoxin-type, iron-sulphur binding domain	Interproscan
IPR010226 all species →	Family	NADH-quinone oxidoreductase, chain I	Interproscan
IPR017900 all species →	Conserved_site	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10849 all species →	NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003954 all species →	Molecular Function	NADH dehydrogenase activity	Interproscan
GO:0005747 all species →	Cellular Component	obsolete mitochondrial respiratory chain complex I	Interproscan
GO:0006120 all species →	Biological Process	mitochondrial electron transport, NADH to ubiquinone	Interproscan
GO:0009060 all species →	Biological Process	aerobic respiration	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016651 all species →	Molecular Function	oxidoreductase activity, acting on NAD(P)H	Interproscan
GO:0032981 all species →	Biological Process	mitochondrial respiratory chain complex I assembly	Interproscan
GO:0045272 all species →	Cellular Component	obsolete plasma membrane respiratory chain complex I	Interproscan
GO:0051539 all species →	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03941	NDUFS8; NADH dehydrogenase (ubiquinone) Fe-S protein 8	EC:7.1.1.2	Non-alcoholic fatty liver disease	ko04932	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.