Detailed information of RMX54552.1 in Pocillopora damicornis

Genomic Location: SczhEnG_1249:494283...523699
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11707
all species →		Npa1Ribosome 60S biogenesis N-terminalFamilyInterproscan
PF16201
all species →		NopRA1Nucleolar pre-ribosomal-associated protein 1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039844
all species →		FamilyNucleolar pre-ribosomal-associated protein 1Interproscan
IPR021714
all species →		DomainNucleolar pre-ribosomal-associated protein 1, N-terminalInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR032436
all species →		DomainNucleolar pre-ribosomal-associated protein 1, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13500
all species →		NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000463
all species →		Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000466
all species →		Biological Processmaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14861URB1; nucleolar pre-ribosomal-associated protein 1-Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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