Gene detail

Detailed information of RMX54781.1 in Pocillopora damicornis

Genomic Location: SczhEnG_1193:151743...164645
NR annotation: no NCBI-NR hit recorded
Species abbreviation PDAMI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-pdam_00018601

tcaagatggcggacgaCAACGGATCAAATGAGTCGCCAGATCAAATCAAGTCTCTGCGGGACGAAGGCGGCGGCAAAGAATTCACAGATCGCGAAGTAAATGGAGTTATCGAAGAGGAACCTCCAAAAGGAGGTAATCAATTGGTATCGGTTAGCtctaaaaagaagaagaaaaagaggaagggAAAAAGCAATGAAGGAAGTGAAACTGTGGTTGAGTCTCTGCCAAGTCCGGCAGTTAACCTGCAAAATCTACGCGAGCTACAAAAGAGCTTCGAACGTTTGCGGGCTGTGGAAGTGAAAGCGCCCAAAACAACAGAAGAAGCTATGAAGAAGAAGTATCAGTTCTGGGACACTCAGCCGGTACCTAAACTAGATGAAGATATCATTGAATGTGGATGTATTGAAGAGGACAAGGCTGTTGAGCAACTGAGACAAGAACCTTATACCCTCCCCCAGGGTTTTGTTTGGGATACCTTGGATATCAGTGATGCGAAAGTGCTCAAAGAGCTTTATACCTTACTGAATGAAAACTATGTGGAAGATGATGACAACATGTTCAGATTTGACTATTCTCCAGATTTCCTTTTGTGGGCCCTTAAACCTCCTGGTTGGAAAATGCCATGGCACTGTGGTGTGCGTGTAGCAGGCAACAATAAGCTTGTGGGTTTTATTAGTGCCATACCTGCACAAATTAGGGTTTATGAACAGATTGTCTCTATGGTTGAAATTAACTTCCTGTGTGTTCATAAGAAGCTCCGATCCAAACGAGTTGCCCCAGTTTTGATAAGAGAGATCACAAGAAGGGTGAACTTGGAGGGGATTTTTCAAGCTGTTTATACTGCTGGTGTAGTTCTTCCCAAACCAAAACTGATTGAGGTCAAGTTTTCCCATCTCAGCCGTAACATGACCATGCAGAGGACTATGAAACTTTACAGACTACCAGAAGAGACAAAactaaaggaaatttgtacTCTAAAAGAGCAGGATGTGAGCTCTGCATATCAAAGTACAGTGAAGTACCTGAAGAAGTTCAGCTTAGCCCCAGAGTTCTCGGAGGAAGAATTCAGACACTGGTTTACTCCTCGTGAAGGCATCGTAGATTCGTTTGTTGTCAAGAACGAACAAGGACAAGTCACCGACATGATCAGCTTCTACACTTTGCCGTCCACCGTGATGCATCATCCAGCGCACAAACAGCTCAAGGCTGCGTACTCTTTCTACAATGTGCCGCAAACTGTTCCCCTTGTTGATCTGATGCAGGATGCGTTGATTCTAGCCAAGCAGcgCGAGTTTGATGTGTTCAATGCTCTGGACCTTATGGAGAACAAAGAATTCCTGGAAAAGCTCAAGTTTGGTATCGGTGATGGTAACCTACAATATTATCTGTACAACTGGAAATGTCCGTACATGGAGCCCACTAAGGTTGGACTTGTTCTGCAGTAAACATCGGAATGTTCTGGATCAACAGAACATCCTCTCTAGACCCTCTTGACATTTAAACGATATAAtggtaacaacaaaaaagcttGCGGATGAGGAGACACACTGTAAGGAAATACATGACGCAGGAGCGTACTCGATGAAGGCCACGACGCAAAGAAGCTAACTCAGAGTgaatttcctaaaaaaaaattaacaacaaaactgTATTTAAAGCGCTTTATCAAGCATACTGCAAGCTGCAGACGttagaaaaaaagcttttttttttaatgtgtatGCGTTTTGTGGGTATTGCTAAATCGGCTTAGTGTCGGTATCTGAACAACTGCGTACctacccacccctcccctaacccaacaaccGTCAAATGATAGCAACTGAGGATTGATGTTTGGttagggggaggggtaggcGTGCATTTGCTCAGATAATGAAactattttaaagatttttgttatcaGATTTTGGGTAGTTTCGTTTATACTTGTTCAGTGATAATGAAAGTACTGTAGAGAATGTACCTTTTTCAATGGATGGATTAGATGGAAACTAGATTGCGCCGCTTATGGAAAGCAGATGGTATTAATACACGAAAGCTAGTCTTACAATGACTTTACAAGAATTAGTTAGAAACGACTGGTAGGGAATTGTACTTAAAAGGTTTGTACTTGTGAGCTTGATTAGacatttacaagaaaaaaaaaaacaaaaaaacaaacatgacaGCTGACAAACTATGTCGTCAGTTGGCCAGTGTTGTGCAAGTCAAGGTTTTCAAATCTTAGGGTCAAAAATATCGGCAGTGTTAAGAACTTTCCGACTTCATGAAAACGTAATTGTCCTGCTATGGGTGATTGTAACCTTGCATGACATTGAGTCACCAGGTGTCACGCAGGGTGACAAACGCAACGTGGTTTGTATTTCAAGTTGTAGAACCAGACTTAAGTTGACAATCACAAAAAATGCCATGGAGTAAGTTGAAAGTTTATGAAGCTTCTTAACGGACAGTTTTGCATGGGAATCAAGGAAGTAAGAGCAGTATTCTTCTTCTTGGACGTCAGATTCTTGACTTGCCTCATGCATATACTATGGAAATCTGGTTGCAACCATCTTATTTACTTCCTATTTAAAAAgcagtttgaaaaaagtaacGCTACTAGTAACGGAATGTTTTAATTGATAGTAAACTGaatatattcaatttttcatgtttatggTATTGTGTGGTTTGCAAATTGTGTGTTAAACAATGGGGGGGGACGCATGGTTTTTTAGAGGAAACGGAGGGTGGGGTCAGTTGTCACTAATAGAGTATTAGTGGGGACCACAGAAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02799 all species →	NMT_C	Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain	Domain	Interproscan
PF01233 all species →	NMT	Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000903 all species →	Family	Glycylpeptide N-tetradecanoyltransferase	Interproscan
IPR016181 all species →	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR022677 all species →	Domain	Glycylpeptide N-tetradecanoyltransferase, C-terminal	Interproscan
IPR022678 all species →	Conserved_site	Glycylpeptide N-tetradecanoyltransferase, conserved site	Interproscan
IPR022676 all species →	Domain	Glycylpeptide N-tetradecanoyltransferase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11377 all species →	N-MYRISTOYL TRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004379 all species →	Molecular Function	glycylpeptide N-tetradecanoyltransferase activity	Interproscan
GO:0006499 all species →	Biological Process	N-terminal protein myristoylation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0018008 all species →	Biological Process	N-terminal peptidyl-glycine N-myristoylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00671	NMT; glycylpeptide N-tetradecanoyltransferase	EC:2.3.1.97	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.