Gene detail

Detailed information of RMX54796.1 in Pocillopora damicornis

Genomic Location: SczhEnG_1188:193908...198798
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01280 all species →	Ribosomal_L19e	Ribosomal protein L19e	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000196 all species →	Domain	Large ribosomal subunit protein eL19 domain	Interproscan
IPR039547 all species →	Family	Large ribosomal subunit protein eL19	Interproscan
IPR023638 all species →	Conserved_site	Large ribosomal subunit protein eL19, conserved site	Interproscan
IPR015972 all species →	Homologous_superfamily	Large ribosomal subunit protein eL19, domain 1	Interproscan
IPR033935 all species →	Domain	Large ribosomal subunit protein eL19, eukaryotic	Interproscan
IPR035970 all species →	Homologous_superfamily	Large ribosomal subunit protein eL19 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10722 all species →	60S RIBOSOMAL PROTEIN L19	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02885	RP-L19e, RPL19; large subunit ribosomal protein L19e	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.