Detailed information of RMX54974.1 in Pocillopora damicornis

Genomic Location: SczhEnG_1146:109099...132757
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10537
all species →
WAC_Acf1_DNA_bdATP-utilising chromatin assembly and remodelling N-terminalDomainInterproscan
PF15613
all species →
WSDWilliams-Beuren syndrome DDT (WSD), D-TOX E motifFamilyInterproscan
PF02791
all species →
DDTDDT domainFamilyInterproscan
PF00628
all species →
PHDPHD-fingerDomainInterproscan
PF15612
all species →
WHIM1WSTF, HB1, Itc1p, MBD9 motif 1MotifInterproscan
PF00439
all species →
BromodomainBromodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036427
all species →
Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR013136
all species →
DomainWSTF/Acf1/Cbp146Interproscan
IPR028941
all species →
DomainWHIM2 domainInterproscan
IPR018359
all species →
Conserved_siteBromodomain, conserved siteInterproscan
IPR001487
all species →
DomainBromodomainInterproscan
IPR018501
all species →
DomainDDT domainInterproscan
IPR001965
all species →
DomainZinc finger, PHD-typeInterproscan
IPR019787
all species →
DomainZinc finger, PHD-fingerInterproscan
IPR011011
all species →
Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR047171
all species →
FamilyBromodomain adjacent to zinc finger domain protein 1AInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR028942
all species →
DomainWHIM1 domainInterproscan
IPR019786
all species →
Conserved_siteZinc finger, PHD-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46510
all species →
BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 1AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000228
all species →
Cellular Componentnuclear chromosomeInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0006338
all species →
Biological Processchromatin remodelingInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008623
all species →
Cellular ComponentCHRACInterproscan
GO:0031445
all species →
Biological Processregulation of heterochromatin formationInterproscan
GO:0045740
all species →
Biological Processpositive regulation of DNA replicationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11655BAZ1A, ACF1; bromodomain adjacent to zinc finger domain protein 1A-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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