Gene detail

Detailed information of RMX55468.1 in Pocillopora damicornis

Genomic Location: SczhEnG_1047:288093...306843
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

pdam_00013332

Transcript

rna-pdam_00013332

ATGACTGATGTCGAAATCGTACCTAACACCAACATAAATGACGCAGATCCGTTCAATGAAGACGAGGCCGAGAGACGGTTTCTGAACTCCAAACCAACATGTTTTATTATAGTTGGAAAGCCGGGTTCAGGTAAAACCTCCCTTGCAAGGAAGCTTGCCAGAGCATGGAAATGTGAGCTTATTAATGGCTCAGAAATAATCAATCAAGGAATTGAACTGCAAACAGAACTAGGTGCCAATGCACAAGATATTTTGCTGAGAGGTGAAGCAATTCCTGAAGAAGTTTGTGCCAAGGTTTTATTGGACAAGATCAGTTCCCCAGAAGTTGCCCATCATGGGTATGTACTGGATGGATTTCCTTCATTGTGTGAGGACTGGTTATCAATGGCTGATCAGCTTGACCTTGTAAAAAATCTACCACTAACACCAGACTTTATCATTAATATGAAGgaggaagaagaaagagaagagatcACACCAGAACTTGTTGCAAGACTTGTCACAAGGCCAGAGGACTTACCTCAGAATGTTGCTACCAGTATCAAAAAGTATCGTGACATGATGCTGAGAACACTTGAGGATTACATGGCTGATCATGATCAACAGAAGCTTATTGAGTTGGATGGTAATGAGAGTCCAAAGGTTGTCTTCAAAtctcTTATGATGAAACTGAACACCTTCAAATTAAACCATGCACTGGTGCCCCTACGACTTCAAGGAGCAGAAGAAGGAGAGGAAATATCAGATGATACAGAGACTGATGACCTTCTGCGCACATTGGCAGCAACTGAGATGGTAGCACCCAAGTTCCGTTGGCGACGCAGCAAGTGGGGACGTGCTTGCCCTGTGGCATTGAAGGAGGGTAACATTGCTCAAGGCGTGGCACAGTTTTCAGTCAGtttcttggACAAGCTATATGTGATGGCATCAAATGAATCACTGGCCCACTTCATGAGGAATCCACGTCCCTTCCTTGCCCCCCACTTGCCTTGTCCTCCCTGTAAAGTGTGTGTCCTGGGTCCACCCCACTCAGGAAAAACTGTACTGGCTCAATCATTGGCTCAGAGATACAATGCCAAGGTTTTTGACATTGATGAATTAATCAAGCCACGGAAAGAGGCTGCTAGGAAGAAAATGTTGGATGAACTAAGGGAGGAAACTATCGAATCTGCAAAATCCAAAATAACTGCAGCAAAACAATCACAACAACTTGAAGCTGCTGAGGAGGGAGATGAATCTGATCCAGCTGAAGATGCTGGAGAAGCAGCAGTAGAAGGGAAAGAGGGGGATGAAGATGGAACCAGTGGAGGAGAGAAAACACAGGAAGGAGATGAAGCAGGTGATGATGGTAAACCAAGGGTGGCTATTAAGGTAGAGGTACCTATTGATGCTAATCATCCTGAAGTTGTGAAGATTGTCAATGAGGTCATGGCCGAGGCTGAGAAAAGAGAACCTGAACTACCACCAGATGAGTATACTGATGTGATTGAAGAGGCTATTCAAAAGAGATATGCTGAGCTTCAGGAACTGAATCCTGATGGACCTCATGCTGGTGGTTACATTTTGGACAACTTTCCAAGAACACGAGAACAGTTCACTTCAATGATTGAAAGGAACATTGTTCCTGATGAGGTGATATGCCTAAGAGATGATAGTGAAAATGGAGAATACTTGCTGAAAAGATGGTATTACACCAACAAAGAAGAACTTCACGAGAAATGGGAGGCCAGACGCGCCGAGGAACGAGCTAGACAGGAAGCCGAGCGAGCTGAAAgggagaggaaagaaaaagaagaagctgAAAGAAAGGCTGCGGAGGAAGCCAAGAggaaggaagaggaagaaaggcTCCGGCAGGAGCAAGCTGAGGAAACCGGCGAGGGAGAGGAAGAAACACAGAAGGTCGATGGAGAGGATTCTAAGGAAGAGAAGGCAGgagaagaggaaggaaaagaagaggaaggaaaagaagaggaggaggaagacGATGGTGCTACTACTGAAGCTGAACCGAAGGCTACTGAGACACCTGAGGTGCAGCCTTCAATAGAAGACCTGTCATTAGGTCCGGGACCCGAAGAAGAGGAGTTAATCCTGGATTCAGACATGCCACCCAATACTCCCGAGACAGAGGAGTTCAAGAATCTTAGAACGAACTATGATCGAGACTTTACTCAGCTGTTGTCTGTATTGAAAGGCACGAATAATATAGAACCTATAATGGTAGCTGTTGACAAAGAACTGGACAAACTAAGCAAGGAGGTCGTCAAAAGAGTTGAAGTTAAAGTCAATCGCATTTCTGTTTCAGCCCCGTTCAATTACCGCGGCTGGGAGTACACAGGAATGGATcaagacgaagaagaagaagacttcgcggaggaagaagaagaggaggaagaggaagaagaggacATTTATAACAAGGACAAGAAAAAGATCTTTGGGGACACAAACCATTACTGTCCTGTAATGTTGAAGGAAAAGTTCGTTTTGTGGCCGGGTATCGCTGAATGTGCTGCCAAATACCGCGAGAGAACATACTTTTTCTCCTCTCCTGAATCTAGGGGTGTCTTCTTGGATGATCCAGAGAGTTTTTTGCCGAGCAATAGACCTCTTGAGCCTCCCCCGATTCGTCTTTTGATCGTTGGTCCCAAAGGAGCAGGTAAAACCCTTCATGGCCGTCAACTTGCCAAACAAATGGGCGTATTCCACATCTCATTCAAGGATCGTCTCCAGGAACTTATTATCGCAAAGACGAAAAAGAAGATTGGGCCTGAGTATGATGATGACGAAGAAGGAACCGGTGAACAAGCCATCACAGCACCTGAAGGACTGGAGGGGACTGATACAGAAAATGCTATTAAGGCTGGAGAGGGAGAAGCTGATGGCGAGGAAGGGATTGGGGGCGAAGGAGAACAAGAACTGGAACTAACAGACGAAGAGGAAAGCATCCGCGCCAATTTAGCTGATGGTGAAGCCTTACCAAACGAAACTCTGGACAAGATTCTCCCAGCATGGTGGAACGAGGAGCCCTTCAGATCTACTGGGTTTATCTTGGAGGGTTTCCCCCGTACTGAAGCTGAGGCTCGTTACCTTTCCTCCGTGGGCCTGTTTCCAGACATTGCAGTGATCCTTGTGGTGGAAGACACAGAAATTGTTGACCGCCTCCTGCCACCACTTCTTGACAAATGGCGCCTGAAACGAGACAAGCGAGAGGCGGAGAAGGAGCGACAGCGAGCATTGGCTAAGAAACAgaagGACGAAGATAGAGCGCGGCGACGGGAAGAAAAGATAGCGGAAATAGAGGCCAAAAAAGCCGAGAAAATGGCCCGCAGGGCGCAGAGGGACAGCGATGACAGCGAGGATGATGGAGACGAAGATGAAGAGGACGAAGATATTGAGGCGCTATTGGATGCTGAGgaggaagatgaagaagaaatggaggaagaagaagaggagagTGAAGAGGATGCTATCGAACGACTGAAAACTGAGATTGGAGATCGGTATGACGAGGAGACGGGACGAGTTGCTACTGTGCAGgAAACACTAGAAGAGATTTCAATTCCTCGGGTTGAAATTAATGGCGGACGGAAGCCGCGCATTGTAGAGTATTGTATCAAGAAAGTTCTGAAGCCTGTGGTTGATTTCCGGGAGAGTCTATTTGATCGGTGCTTCGCTATTGATGGTTACTTGGCCAACAGAATGCTTGCTATGGGTTACAAGTTTCCGAGTCGCTTTGGAAGGTGGTGTCCTGTGAAGttgcTGGAAGGTGAAGTTCTTCCCCCTCAACACGGCTTTGGTGTTAATTCCTTCCCTGTTGTCTACCGACAACATATTTACTTTTGCTCGGGACGAGACGAGCGGGAGACGTTCATGCAGTGTCCATCACGTTTCTTGAAACAACCTTCTCCTAAACCTGTCGTTCCTATTAAGATGGCGATCATTGGACCTCCAAAGTCTGGCAAGACTGGATTGGCAAAGCGTTTTGTGGCGGAGTATGGCGTAGTGAGACTATCTATAGGAGAAGCAATCAGAAAAGTTCTGAATTTCCAATCATACACGGAACTGGCTCGACAAATCAACCTTCACCTAAAGGCTGGGAACCCCGTGCCAGATGAATTGGCGGTACAAGCTTTGGAGGTCGCCCTGTTGGACATGCAGTGTCAGACGCGAGGgTTTATACTTGACGGATATCCTGTCACCAAGAAACAAGTGGAGCTATTGACCGAGCGGAAGATTATTCCTGTTAGAGTTCTGGAACTACAAGTAGATGATGACGAAGTGTTGAGACGAGGAACCGCTGACCGTCATGCTCCAACAAGGGTCCTTCCTTTGCACGATAGTCAACAGATACTCGGCATCAGGCTCAACGCCTGGCAGCGAGAGGTTGTGGAGGTCAGAGACTGGTACCAAAAAGAGCACAGAAATTGGGTGCCTATGGACGGTCAGCGGTCGAAGTGGTGGATTTGGAACCAGGCTCTTGATGAAGCCAGAAAAAGCGTCCGTCAGATTCAAACTTACCTACAGAGATTATCTGAAGGCAAAGCGGCGTCAATAGCGGATATGTGTATCACACCGAGTGAGTGTCTTGTCCGCTTGGGCGACTTTGGCCAGTACTGCCCAGTCAGCTTAGCTGACCGTGGAGAGTTGGTCGACTGTTCTGTAAACTCTTCGCTTGAATTTGCCGCCGAGTTTCGAGGACGTTATTACAAAATGGCGTCCAGAGTGGAACTAGAACTATTTCTCGCGGATCCAGCTCGTTACGTTCCTCCTCAGGCCCCTAGAAAACTCCCTGCTCCCGACCTCCTTCCGAAAAGAAGGACGGAAGCGGAAGTTAAAGCTATGTTCCCTAAACAGATTGAACTAAAAGGTTACTGTCCTGTGACGTATCTGGATGGCAAACTGAGATATGAACACATTGTTCCTGGAGAGACAAACTTAGTGGTTGAATATagagaaaaactattttgctttgaatcggaagaaaaacttcaaaaatttatgaGGCTACCAGAAAAGTACCACGGATTGACACTACCACACAAGTTACCGCCGCCAAAAGAACCTTTACTTGTCAGTGGACTCCCTATGTTAGGTTACATGGAGCAGAGTGTAGCCACTGCTTTAACCAAAGCGCTAACTGCCGTGGGTTGTTTCAAACCGAAGTATCCATTCATTGATGCTAAGAAATCTGCCTTACTTTATATTGGCTACCACCTTAAAGcCTACAACCCTAAGAGCAGTGAGTATGTGcgcaaaaaatacaaacagaaaTTGATGAGGTTCGAGGAAGAGTGTGAACTGATTGGGTACCTCGGCAAAGAGATGACCGCTCGTTACCGAGAACCAGATGAACTACCCATCGACTTTGATCACAAACTGTCAGTTTTTCTGGCGCTTAAAGACATAGAACCCACACCGACCTGGTGTGCGTGATACTTCAGTCACGGTGAAATCGTTCGTACGTGAAGTTTCCTACAAAGTTGTGATGAAAGacaaagttatttattttgaaagaaatcatggTTTACTTCTAACTCTTGACTAGCATTTGGATCTAAATTGAACCGGTATTGTGCAATGTAAATATAATGTCCGCAACAAGGTGgcaattgtaaataaaattcgTTTTGACTCCTAATCGGTCTTTTTTAAGTGCCTTATTCACTTTTCGCCAAAGATCATAAATATGCGCGCATGATTTCCCTTACAACGAAGCAcataaattttccctttctgaAATTGGAGCTGGCTTATGTTCGATCCGATACTGCACGTGGCAGCGGTCCAAAAGTTCAGTTAGtcattgatgaaaacaaaactaaattagTCTATATTTTGTGCACAATTTGACAAATAGTGACGATGGCTGGTGCTTTTAATAATGGAGGATggagaagggaaaaaagaggaaagtgtTACAGCGCCGTCGTTTCACCATAAGCcgttggtttaaaaaaaacgcGAAAATCGCGCCTCGAGGGATTTTCTTCAGCTTGAGCAAAAGACGCGGCCTCCACATCTCCTAATCCCTCTATTTCCTCTTTCAATTTGTCAACTAATGTTTAAGGCAACATTATGCAGTGTGGAAACGTATTCtcctctttttaaaaataaaataatctcGACAGCGACTAATTTAACTTTTGAGTCTGTTCTATGGGTATTCTGTTTAGGGTAGTCTACCACTTCTCTAGTTTGGTGGTCCATGCAGCAGGGTCAACGATTTGAACTAACTCTGAAAAAGTAATTCCACTGGGTGTGGTGCAAACTTTGCCTAGTTACATCGGGAAGTTTTCCGCTAGTGTGACTACCCTATTCATGATTTTCGTTTGATTATGTTTCAATCAAACTCGAGTGTGGACGTTCACGATGACAAATTTGTCTTCAAGAGCAATACAAACTTGAGCCTTTACCGGTGAAGCTACAAGTCCATGGATgttgctttcaaatttcataGATCCGAGTTGAGCGCGTGAGAAAGCATTCCAGATCCTTAACGTTCCCGATTCACTGACCGTTGCAACTGCATCGCCAAAGTCTTGCTCTAGATAGCCACACCCTTTGAGTAGATTATCACCGCAACCCAGGCGTTTCTTCAGATCAAGATGCTGACCATCCCAAAGTTGTAATGATCCGTCAATGTGTCCTGTGGCAATACAGCGTCCATCAAACGAAAACTTACAGCATTTGACAATTTCTTCTTCAGGAACGCTTCGCTGAATGTGATGCACTTTCACTGTATCGTACAACATTAGACCTCTTTGACGATTACAGCATAGGAGACGATAATGAGAGACGCCGTCTTTTTGCTCGAAAACAAAGATGTCGCAGCACTCGATCATAGACTGCTTGGGGCCATTGATGTCCCTAAACGTCGATTCATCGAGATTCCAAATCTGGATATATCCCGATCgggaaacaaacaaaaccagatCATTGTCGAGGTAACTGAAGAACGTTTGGGGAGTGATCGGATGTTTTAGAGATTTAACTCTTTGTTGCAGGTCGGAATTCCACAATTCAAAACAAGCTtctctttgaaacaaaatcgATTTGTCATTCGGTGACAGTGCAAAAGACTTTGCGTGGATGGACCGGTTACCACGAAGCCATCTCCCGCTGGAAGCTTCATATACACTCATTCCCACTTTGCACAAAACGTATAAATGCTGACCGTTAGCCGAAAAGGAAACAGCTCTCACTCCACAATCTGCCATTTCTGCAGAACTTTTGTTTTCGAGAGTTCGACACATATAGACCGTGTTTAAGTCCTTCAGAAGCACTCTTTCCGTGTCAATCTCTTTGGCATATGTCCACCTGGTTCGCTTCGAAATTGGAGCAATACGTATTGCGAATGGCAAACCCGGGCAATGTAGCTGGCGAGATTCACCACATACGTACAAACAGTCTCCACGGTTTGATACACCAAGACTTTTATGAGTCGATCCTAGGTTTAGCTCTCTTAGTTCAGAACACTCAAATTCATTCGTAAGCAATTCACAGAATGTCAAGAGTTGTTTCTTGGAGGAATTCAGAAGCACAAACTGTGAATTTCCTTCTGATCCAGAGAGACAATCCACTGTTAAAGGTTCTTCGTTACTAAATGCATTCTGCTGATAAGTGTGGTCGCGCACATTCATGTTCCAAAGGGAAACACCTCTATCAAAACTGCCTGAGATGACATATTGCTCACATGATGAAATCGCACAACATGTGACGCCCCCAGTGGGCGGTTCCAATTTGATTACCAGCTCTCCTTTGTCAAGTTCCCAAATCATAAGGTTGTTTGTCACATGAGTTTCCCTAGTCACCATCGTTTTTCTGTCTTGTGAGATACAAGCATCGATAAAGGTGTGCTCGTTTTCTGGAAATAGCTCCTTTGATCCACCGTCAAATGTTACAGCTTTATCGAATCGACCGTGGACAACCACACCATGTTGTGGGACAAAAAAACAGTAGTTACAACGCTCTTCCTCGGTTGGCCAGATGTCGATCACTACGTCAGATCTGTTCCTCCATAGTTCTCTTCCTGTTTCCACTGAAAACATGTGGACGAAACCTTCTGCACATCCACAGACCAACAGAGTGTGCTCAGCCTGGTTTAAAATATCACAACAATTTACGCTGGTTTTGCAGCGGAACTTAGTGATCACAGGGTCTGTTGTCTGGGATCTGTTAACTACCTCTAGGCGGAGGGGAAGTTGGTACTTTGTTTGATACATCACAGAACAAGCTTCGAGACTTATTGCTGTAGATTCGGCTTCGTTCactaataactgaaaaatcatGTTTGGGTTCTCCATCAACAAGTAGGGATGACGCCTGAGGCAAGTTATACAATCATCGACTTCTTTCGAGTCATCACCTGAAAGCTTCAAGACTGGTTTGATGCTTTGAAGTTCCTCAATTAATGAGAAAACGTCGCAAGCTTTGCTCTGCAATTGAGCAAATAGCAGCTCCAGGCTACATGCATGACGAAAAAGTCTGTTTTTCTGGCTTTCATCTAGTTTTGGTAAGGCTGTGAAATGGTACGTTCCATGCTGAAGGGCGTATCTTTCTTCTTGAGAGTACTCCACAGGGACATCTTGACGTTGCTTGATGGAATTGTAGGTCCTTTCGCATTCTTTCAATAACACGACATTTCCTCGTGTGATTTTTACCGTAAATTTATGTTGACCGTACAATTCAGGGTGACAGAGCCAGTCAACAATTGATTTATGGAAAACATCGATGCAACCGTCATGAATGGGCAGCAAACGTGAGATTGATGCTGACATCTTTTGGAATTGGCTCCAACCATCCTCAATGTCATAGCACAGGCCGAGAATTCTCGACGCCATGGTCGCAGGTAAAGGAGAACGTGCAGCAGCAAGTGACGAAAGAAAATCGAAGAAACGCTCTTTGCCAACTCCAAGATCCTTTTGCAGGCGATCAATATATTGCTCATAGACAGATGTGATCCCACGAGGGAAAACATCTGAGAGATTTGAAGGTGTGAGGGTGCTTTTATGGTCTTCGACATGCTTAATGACAAAGTGTGCATACAACATAAGTCCTTCTGCTTGACTTACAAAGCGACTAACATTTTGCTCGATGCTGGTATTGGGCAACAGCCGCCTTAagctttcttcaaaaaatagCTCGATGTCTTTCTCGTTCTTCTCGTCCGAGGGGTGGAGGACAAACGGGTTGAAGTGAGCTAGTTTGTCAATCATTGCTTGCTCAGTGCGACCGGTGATAACAAACTTTATCCAGGATGGTAGCTTGTGGAACTGTGTTCTTATCATATCAAAGAGTTCGTTTCTTCCCTGATGTTCACATTCATCTACAGCGTCCACCACCAAGAGGATGTTCATCCCTGGATCTGCCATCATGTTCGTAGTCTCTTGAAGAACGTGCGTAAACAGTTCCTCCACATTCATGGTCGTCAGATCAGTTGTGTTTAAGCAAGCCAACTGACCCGTCAGGACTTCCTTAAAACCTGGAAGATTGTCACACAAATGTCTGGCCAGTGACTGCACCATTAGCTCTGGTTTCCTTCTCCTCTGGTTATTGTGCTGACAGAAGTGCATTCCACCAAGCACCGAGCGCTCTTTCATGTTATGGCATAACTGTGCTGCAATAACAGATTTGCCCATACCAGCATTTCCAGTTATGATAAAAACACGTGAATCAGACATGCGATTTTGAAACCAACTCTCGACATGACTGAAAACCCATTTACGAGTTCCTGGATGATGCTTGGATGCGTAAAAATGGACTTCCCCGGAGAAATCAAACTTAGCAAGTCTTTCTATGCAAATGTTAGCAGACAGTGGCGCGGCTCTAAGATTCTCTACTCGCGAAGCGTCTTCACCGAGACGTTGAACTGCGTCAGCAATCTCCTTCCAAGATGATTGAAATGAAGCTTCGTCGATCTCGACAATCGTTGCGTGACTGTAATGGTTTCGATACCAATGTATCATTTTCACTGCAGCCTGGGCCGTGTTATCCGTTGAAGGAGGTTTTGCGGCCCAGCCAGTAGCAGG

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00406 all species →	ADK	Adenylate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000850 all species →	Family	Adenylate kinase/UMP-CMP kinase	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23359 all species →	NUCLEOTIDE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006139 all species →	Biological Process	nucleobase-containing compound metabolic process	Interproscan
GO:0019205 all species →	Molecular Function	nucleobase-containing compound kinase activity	Interproscan
GO:0004017 all species →	Molecular Function	adenylate kinase activity	Interproscan
GO:0004127 all species →	Molecular Function	(d)CMP kinase activity	Interproscan
GO:0004550 all species →	Molecular Function	nucleoside diphosphate kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006165 all species →	Biological Process	obsolete nucleoside diphosphate phosphorylation	Interproscan
GO:0006186 all species →	Biological Process	obsolete dGDP phosphorylation	Interproscan
GO:0006757 all species →	Biological Process	obsolete ATP generation from ADP	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18533	AK9; adenylate/nucleoside-diphosphate kinase	EC:2.7.4.3 EC:2.7.4.6	Pyrimidine metabolism	ko00240	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.