Detailed information of RMX55475.1 in Pocillopora damicornis

Genomic Location: SczhEnG_1047:128650...153698
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010997 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00963
all species →		CohesinCohesin domainDomainInterproscan
PF16070
all species →		TMEM132Transmembrane protein family 132FamilyInterproscan
PF00055
all species →		Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan
PF00102
all species →		Y_phosphataseProtein-tyrosine phosphataseDomainInterproscan
PF13385
all species →		Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00028
all species →		CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008211
all species →		DomainLaminin, N-terminalInterproscan
IPR002126
all species →		DomainCadherin-likeInterproscan
IPR015919
all species →		Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR003961
all species →		DomainFibronectin type IIIInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000387
all species →		DomainTyrosine-specific protein phosphatases domainInterproscan
IPR029021
all species →		Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR002102
all species →		DomainCellulosome anchoring protein, cohesin domainInterproscan
IPR031437
all species →		DomainTransmembrane protein family 132, middle domainInterproscan
IPR003595
all species →		DomainProtein-tyrosine phosphatase, catalyticInterproscan
IPR020894
all species →		Conserved_siteCadherin conserved siteInterproscan
IPR000242
all species →		DomainTyrosine-specific protein phosphatase, PTPase domainInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR016130
all species →		Active_siteProtein-tyrosine phosphatase, active siteInterproscan
IPR036439
all species →		Homologous_superfamilyDockerin domain superfamilyInterproscan
IPR036116
all species →		Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR048287
all species →		DomainThrombospondin-like, N-terminal domainInterproscan
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR039808
all species →		FamilyCadherinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24027
all species →		CADHERIN-23Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0007156
all species →		Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0016311
all species →		Biological ProcessdephosphorylationInterproscan
GO:0000272
all species →		Biological Processpolysaccharide catabolic processInterproscan
GO:0030246
all species →		Molecular Functioncarbohydrate bindingInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0007155
all species →		Biological Processcell adhesionInterproscan
GO:0004725
all species →		Molecular Functionprotein tyrosine phosphatase activityInterproscan
GO:0006470
all species →		Biological Processprotein dephosphorylationInterproscan
GO:0000902
all species →		Biological Processcell morphogenesisInterproscan
GO:0005912
all species →		Cellular Componentadherens junctionInterproscan
GO:0007043
all species →		Biological Processcell-cell junction assemblyInterproscan
GO:0007275
all species →		Biological Processmulticellular organism developmentInterproscan
GO:0016339
all species →		Biological Processcalcium-dependent cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0016342
all species →		Cellular Componentcatenin complexInterproscan
GO:0034332
all species →		Biological Processadherens junction organizationInterproscan
GO:0044331
all species →		Biological Processcell-cell adhesion mediated by cadherinInterproscan
GO:0045296
all species →		Molecular Functioncadherin bindingInterproscan
GO:0098609
all species →		Biological Processcell-cell adhesionInterproscan
GO:0098742
all species →		Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for RMX55475.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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