Genomic Location: SczhEnG_934:77795...98788
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families
| CDS |
| pdam_00020401 |
| Transcript |
| rna-pdam_00020401 |
| Protein |
| RMX56067.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004393 (this species only) · gene tree & orthology |
| Ubiquitin family | E3|E3 activity RING|PHD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13771 all species → | zf-HC5HC2H | PHD-like zinc-binding domain | Domain | Interproscan |
| PF02008 all species → | zf-CXXC | CXXC zinc finger domain | Domain | Interproscan |
| PF05964 all species → | FYRN | F/Y-rich N-terminus | Family | Interproscan |
| PF00856 all species → | SET | SET domain | Family | Interproscan |
| PF05965 all species → | FYRC | F/Y rich C-terminus | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019787 all species → | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR047219 all species → | Domain | Histone-lysine N-methyltransferase 2A/2B, SET domain | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR003888 all species → | Conserved_site | FY-rich, N-terminal | Interproscan |
| IPR003616 all species → | Domain | Post-SET domain | Interproscan |
| IPR002857 all species → | Domain | Zinc finger, CXXC-type | Interproscan |
| IPR001214 all species → | Domain | SET domain | Interproscan |
| IPR011011 all species → | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR001965 all species → | Domain | Zinc finger, PHD-type | Interproscan |
| IPR003889 all species → | Conserved_site | FY-rich, C-terminal | Interproscan |
| IPR034732 all species → | Domain | Extended PHD (ePHD) domain | Interproscan |
| IPR046341 all species → | Homologous_superfamily | SET domain superfamily | Interproscan |
| IPR036427 all species → | Homologous_superfamily | Bromodomain-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45838 all species → | HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0035097 all species → | Cellular Component | histone methyltransferase complex | Interproscan |
| GO:0042800 all species → | Molecular Function | histone H3K4 methyltransferase activity | Interproscan |
| GO:0045893 all species → | Biological Process | positive regulation of DNA-templated transcription | Interproscan |
| GO:0051568 all species → | Biological Process | obsolete histone H3-K4 methylation | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
RMX56067.1.
