Gene detail

Detailed information of RMX58699.1 in Pocillopora damicornis

Genomic Location: SczhEnG_462:203165...219838
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-pdam_00009506

TGAAACTCTCGGCGATTAAGTCATTGACGAAAACACATTGCTTCCCCATCTCTCAGAGGTGATTCAGCTGTTTCTAACAAACGTTGATTAGAAATGGCTGTAGTCCCTAGAAAAAGGAATGTCATTAATGACACGACACCGATGATGTGCACAATCGAGGGAATTGCCAAGAAAGACCATGTGGATTATATTATGAAAGTGCAGAGGGGCATCAACCAAGAAGACTCGTGGCAGgTTGCACACCGGTATAGTGATTTTGTCACTCTACAGTCAACCCTAGAGgTCTCAGGTATTGATCTTCCAATGCCCCCGAAAAAGGTATTTGGCAACATGGATGCAGCATTTATTGCAGAAAGACAGCAAGGTCTTCAGaattaTATCAACTTTATACTGGCCCACCCAATGTTAACAAGACACATTTCCTTGAAGAGATTCCTGGATCCTGCAAATTATTCACATGACTTTCAAGAAACAGCCATGCAAAATGTAGCCATGTTCTTACGGTCAGTCCCCAATTGGGAAATAGTTGAACCTTTACCTGATGTtgGTTGGCGTTTAAGGAAGcagtttttcttgataaagCCTACAGATCCTACAAAAAAAGATGTCAGGAACATTCTAACCTGGACTGACTATGGTCCTGAATTTAGTTTGGATGAGAAAGATCTAGAAGCTATCTTAAAGTTATTGACATCTTTACAGCATCCTTACATATACCCCCCTTCATTCACCACATGCAATTCAGAAGGAGTTATAGCTGTTCGTAATTTTGTCCCAAATGGAACACTTAGAGACTGTCTCTGTAAGGCCAAACCAAAGCTTAatcaactaaagaaatatGGAAATCCAAAATCTAGAGCTGTTTTACATGAACAGAACATTCAGCTGTTTGGAAGACAAATTCTAGAGGCATTAAAGTTTTTACATGATAAAGGAATTCCCTATGGTCATTTACATTCAGGAAATATCGTTGTGGAAGGAAATATTTGTAGATTACTAGAAATCGAAAATGGTCTCTTGGGCATTCCATCAATTCACAGACATCGTTACGTTCCCATGAAGAAAATACAGGAAAAGGAATCAGAAGATGTTTACTGTTTCGCGCATTTGTTGTATGAGATGGCTTTTGGTGAAGCACTGCGAAGCAGTACACTTCAAGATGTCCCTCCAAACTGTCCATTACAACTAAGATCAGTGTTGCTATCCATCCTAAATGACGAGGCGTGTAACAAGACAGGACTTCCGACTGTTGCTGATCTTCTTGCGAATCCATTTTTTGCAGCCATAGACTTCCCAGCTGGTGATAAGCCTCAActaaagATTCCAAGTAAATTAAAGGAAGCCTTAAAAACAGCCAAAGATCGAACTGAATCTAAACTCAAGGAGGATCAAAAAACGttaCGACAGTTCCGGAGAGCATCTAAAGCGCATGCCTACCACATGTCAgaggaagagaagaagaagagaaagaagtcCGCAAAGAAGTTGCAGAAGGAGGCATCCCTATTGGACACAACACAGACAACAGCACGTCCGCCATCCTCTCCTTCGCCTGCTCCTCGAACTCAAACCTCTGCCATACCACCTCCGCCCCAGGCCCCCGCGCCACCACCTCCACCTTCTTCTCAGCCTCCCACTCAGAAAGCTGCCCCTCCGCCAAAATCATCAGAACGAGGCGCATTATTAAGCTCCATCTGCGATTTTAAGAaaggcaaattaaaaaaggctGAGACTAATGACAAAAGCAAACCCAAATTATAGGGTGGTACAATTTAATATCATCGCTTGAAACCAACTGGCCAAACTGGTCCATTTATAAGGATAATTTGGCTGTCACTCCATATTTTCTTCTCAAATTCTGTTCTCAAGATTTAACATGACATAAATTATTGgtgattataataatgatgCTAACAGCAAAGATGTAAAGTCCCCAAGAACATTTTTATAGGTgtgttcgtttgttttgtacTGTGtgatttggttttgttctatttttcgaaatattgttattactattattattattataattaatattatCGTCAATGTTATCGTTCATGtcatattatttttcactatGATTGAATTGCCTGGTGGAGAAGCTCCGATGATAAGCGCCCGTTGAAGATCAGGAAAGGTGTTAGGTATCAGTTCTAAGATTAGATattatattttcatgatacgttgaacaaattgttttttgtttgttttgttttgtttgttttttttatggcaGTTAAAGCTGACGCAGCGTAGcaaggaaaacaaaaatatcacaatCAAAGGAAGGATGATTCTGCTTTATTATGTAAAGTGGCATACCTCAAGAATTGATTGTTAGCACCAATTACGTTAGACGCAAATCTAGAACCTAGCCGCGAATAGAAGAACAATcttgctgttttaaaaaattaagaaaatgtgATCTAGTTTAGTGGCAGCCATTGTGGATCTTATTCGATGTATGTTCGAACAATGCAAagttatttatctttttaatggTGCACCTGATTTATCCTGTGACTGtgaaaatcttcttttgttttagtgtCCAATAATTTCCAAATCCCCTTAGCTTGAAAGAAATGCTTCAATAATGTCCAATGTCACATGTTTACAGTACGTATAAAACTTATTTACGATTAACAAATGCTCTAGTTCCATTCGCAATGTCACGTTCGTTGTGTGCGAAAAGCTTTTATGGTCATTCCAGTTACTTTTTCAGACTCTCTCTCATTCTCGTTCCCATAGCTCAATGGTTTTCTCTAGCCGATTGGACCTTTGGACGAGAAACCGAGGGACTTTGGGGACGGGAGAGGTTCTTTTTGTAAAGGAAAGAGAGGGCCTGGGAACGAAGCTGTCTTAATTATGCACACGGTAGTAGTGATAAATGCTAAAAGCGCTGAAGATGCTGAATGTGAAAAACTCGATTTTTAGTACAAGTGtaaccaaaaaatttattaattaaacgaaaattagaaataaataatacgAATGATTTAGTTATCTCCTAATCttgtacccagatcctaccgttTAACTATAACTGAAATGTACCGAAATCGAACTTTACTGGACCTTTATATTATACCGCTTGGCCGTGGAAGGTCTAGGTACGAGACTAGCTGTCTCCTGCTGATGTGCTCATATGGTCATTGGAATTTGGGGCTGACTCGTCTCCAGTCTTCTTTCGTCGTTGTTGGGAAGGGCAAGGAAGATGGGATGGAACTGTACCACATTGATCGAAGTTTGTGTAAGCAAATTAAGACTAGGAAGCGGGAGAGAAGACGGCACTCCTGCTCTTAAGGCCTGTTCCCACCTCACTGGACGAAAAGGAGTACAAAAGCAGGTCTCGTCAAAACAAACACTAAATGGTTCTTTTAGAACCATTCTTAGCTAAATTAAGCAAACCCAGCAACCCCATAAATCACCTCACTAAAACTTACTCAAAAGACAACCACACCCGGTGCCTTTGCGACGCCGACGTTTATTCATTCTTTAACAAAACCTATGAGCATGCGCATATTGGCTACTACTTCAGAGTGACATCCAAGCTAGTAGATACCATAACCAATCCACGTacataaacttgaaatatatGTTACAAAAAGGCTAAATACATGTAAGTCCGTAAGCATTGTAAGTAAGGAATGCGCTATATACAATGATGCTgtaatagtccattttacagctgTGTgtgccaagcctttgaacaggagtga

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02205 all species →	WH2	WH2 motif	Family	Interproscan
PF00787 all species →	PX	PX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036871 all species →	Homologous_superfamily	PX domain superfamily	Interproscan
IPR051837 all species →	Family	Sorting Nexin/PX Domain-Containing Protein Kinase-Like	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR003124 all species →	Domain	WH2 domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR001683 all species →	Domain	Phox homology	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22999 all species →	PX SERINE/THREONINE KINASE PXK	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0035091 all species →	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0032780 all species →	Biological Process	negative regulation of ATP-dependent activity	Interproscan
GO:0043271 all species →	Biological Process	negative regulation of monoatomic ion transport	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0003779 all species →	Molecular Function	actin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17543	PXK; PX domain-containing protein kinase-like protein	-	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.