Gene detail

Detailed information of RMX59720.1 in Pocillopora damicornis

Genomic Location: SczhEnG_287:126856...139794
NR annotation: no NCBI-NR hit recorded
Species abbreviation PDAMI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-pdam_00019026

ATGGCGGCTGCTGTCGAAGTCCGATGGCCTAACGAGAAGGATCAGTACGAACTACAAGAGGTGATAGGGTATGGTGCGACAGCTGTTGTTCAAGCTGCAAAGTGCATCCCTCGCAATGAGCGTGTTGCTGTGAAGAGGATTGATTTGGAAAAGTGCGGCGCGAGTATTGACGAAATGATGAAAGAAATTCGTACCATGAGCCAGTGCAATCATGAGAATGTTGTGAATTACTACACATCATTTGTGGTGAAGCAAGAACTGTGGATAGTCATGAGGTTGTTGAATGGAGGTTCAATGCTTGATGTGATCAAACACCAGAAGAAACAGGGTCACCTTGTCGAAGGTGTACTTGATGAGGCTGTCATAGCATCTGTTTTGAGAGAAGTTCTAAAGGGGGCTAATACACAGGTCCTGATGTTGACGTTACAAAATGACCCACCCTCTATTGACACTGTGGCACAGAACGAAGGCAACAAGGAAAACTACAAAAAGTAtaccaaaatttttagaaaaatgatAAGCAGCTGTTTGGTAAAGGATCCCGCTCAAAGacCAGACGCTTCTGAACTTCTAAAGcatcattttttcaagaaagccCGGGAAAAGGATTTTCTGGTGGAGACGTTGGTCCCGCTAATGCCCTCTCTGGGTGAAAGATCACAAAAGGTTAAGCGAGTCCCAGGCTCCAGTGGACGACTTCACCGAGCTGCCGATGGCAGCTGGGAGTGGTCTGATGACGAGGCGAAAAACGACGGTGACAGCGACGGTGAGGGTGACGATGAAAAATCGGCAAAAGCAGATAATGTCaaggaAGGTGCACCAAAATCCGAAGGACCAAAAGTCAACATTCAACCGTCCACACCGACATCGCCTAAACCTCcGGCACAAATCAACTTGGATCTTACTCTTAGATTAAGaaatgcaaagaaagaacTGAATGATATCAGATTCGACTTTACTCCTGGTAAAGATACTGCTGAGGGTGTGGCACAGGAGTTGGTTTCAGCAGGTTTAATAAGTGGGCAAGATTTAGTTGTTGTTGCTGCTAATCTAAGAAAAGTAATTGATGATCCCCCAAGCAGCAAGTCTATGACTTTTCCGCTTAAATCAAGTAGTCATGAACCTCCCGATGATAGGACGTTGATTGGATTCGCGCAGCTCACGATAAACTCTTAGCGACGGTGGAACAGCACTAGtaattcaaaaagaaaagaaatattaaagtaaTCTAGTTTTGTGGCCCTCATCATATTCCATTTTTTAGCTATATTGTTCTCAACAGGATGTAAGAGAAATCATTGGACGAATTAAGTAGAGAAGAGTTAATGCAATCGTAAGAGGAAATTAACCAATGGAAAAGCTGCAGCGAGAagttaatcctttaattccTAGAATAGATTAACATTTAgcttctcctttcaatatctaTAAATATCTATAAATTCAGCAGCAAACAGGTTGTGAAAATACTCAAACCCATCAAGCAGAAATTGTcatcttgatccaacaccaaattctcgtcGCTAATTTGCACGTTAATGTGTcgcagctggaggggagaattaacattcAGACCCTGGGGTCAAATGGTGCAGTGCCGGCCCATAAAATTGTTCTCCTAgaatgagaaagaaactaaatttttcgCTTGGTCgtcaattaaagaaagaggGACAACGGAACAGTTATGAACTTCCACGAGGAACCAGTTTCACCATCTTTCTCCTTTCCCTACTGTATGTACCTGCACATAGATCTGATCCTAGTGGTGTGCAAGACGTTTGTTGCGTGTGGATCTGGTAATAACCTCTTATTAAACGAAGTCCTatgtggctcagtggtagaggaAAATCTGAAGGTTTTgtggttcgattcctcatagGAACTAATCAATTTCTCTTTCTGGGACGCTAGCTACAAAacggaaaacatttttctttttgacctCTTTAGTTACAAAAACGGGCTGTTGCGTAATATTTAGCAACAGCACTTGCAAATGTTGGGGTTCTATAAAAGGTCCTTTACGGACTTTGCAAGTtagattgaaattttcattgtctttttgttttgtttgtttggatATCCAAGGGGCAAATTTCCTCTTGATCGCTACAACAAAAGAGGGTATGATATTCACTCGGTAGGAATATTATGTGTGGGAAATGCGTTTAATGCCTCGAGGACAGTTAATTGCCTTATTACCCCTTGGTTCTTTATGTCTTGTTTCTCTGCGAGTTTGAGCTCTACTTTGGTATTTCTTTGTGAACAACTCCATACCAGCAGAGCCACACACGAGAACTCGGTCCTTTGGAGGGAAATATCATTCTCGTTTAGCTTTGGCTCCTGATTGgcataaaaggaaaatatcttgGTTCTGATTGGTGGAGGCACAATAATACACATTTCATACTGTCCctcatttgaaaatctttcctcCTGAACGATTTCCACTCTTGTCTTCCTTTGGCTCCTAGTATGCTCGAAAGGAAATATCTTGGTTCTGACTGGTCAAGGCACAGTAATACACATATACTGTTCCTCGTCGAGAAATATCTTCTCGTGAACTTCAAGTCTGTGTGAATTTGTGCTAGTCATGAACGTATAGATTGGGACGCGTTCAATGCATTCATATGCAACGCGCTAACTTGTCTGAAGTATATACCCCACTACTGCTAGATAAACTGAGCTAGAAAgtattttattaaacaaatgtgAGTTCA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12202 all species →	OSR1_C	Oxidative-stress-responsive kinase 1 C-terminal domain	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR047173 all species →	Family	STE20-related kinase adapter protein alpha/beta-like	Interproscan
IPR024678 all species →	Domain	Serine/threonine-protein kinase OSR1/WNK, CCT domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48014 all species →	SERINE/THREONINE-PROTEIN KINASE FRAY2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0006611 all species →	Biological Process	protein export from nucleus	Interproscan
GO:0032147 all species →	Biological Process	activation of protein kinase activity	Interproscan
GO:0043539 all species →	Molecular Function	protein serine/threonine kinase activator activity	Interproscan
GO:1902554 all species →	Cellular Component	serine/threonine protein kinase complex	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for RMX59720.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.