Gene detail

Detailed information of RMX60943.1 in Pocillopora damicornis

Genomic Location: SczhEnG_99:292067...305564
NR annotation: no NCBI-NR hit recorded
Species Pocillopora damicornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00181 all species →	Ribosomal_L2	Ribosomal Proteins L2, RNA binding domain	Domain	Interproscan
PF00083 all species →	Sugar_tr	Sugar (and other) transporter	Family	Interproscan
PF03947 all species →	Ribosomal_L2_C	Ribosomal Proteins L2, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022669 all species →	Domain	Large ribosomal subunit protein uL2, C-terminal	Interproscan
IPR008991 all species →	Homologous_superfamily	Translation protein SH3-like domain superfamily	Interproscan
IPR022666 all species →	Domain	Large ribosomal subunit protein uL2, RNA-binding domain	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR005828 all species →	Family	Major facilitator, sugar transporter-like	Interproscan
IPR014726 all species →	Homologous_superfamily	Large ribosomal subunit protein uL2, domain 3	Interproscan
IPR002171 all species →	Family	Large ribosomal subunit protein uL2	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR014722 all species →	Homologous_superfamily	Large ribosomal subunit protein uL2, domain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13691 all species →	RIBOSOMAL PROTEIN L2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0002181 all species →	Biological Process	cytoplasmic translation	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for RMX60943.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.