Genomic Location: NW_025322654.1:219223...233771
NR annotation: XP_029180010.2, N-acetylgalactosamine kinase-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_029180010.2 |
| Protein |
| XP_029180010.2 |
| UniProt accession | Description |
|---|---|
| Q5XIG6 | N-acetylgalactosamine kinase OS=Rattus norvegicus OX=10116 GN=Galk2 PE=2 SV=1 |
| Q68FH4 | N-acetylgalactosamine kinase OS=Mus musculus OX=10090 GN=Galk2 PE=1 SV=1 |
| Q01415 | N-acetylgalactosamine kinase OS=Homo sapiens OX=9606 GN=GALK2 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005490 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00288 all species → | GHMP_kinases_N | GHMP kinases N terminal domain | Family | Interproscan |
| PF08544 all species → | GHMP_kinases_C | GHMP kinases C terminal | Family | Interproscan |
| PF10509 all species → | GalKase_gal_bdg | Galactokinase galactose-binding signature | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006203 all species → | Conserved_site | GHMP kinase, ATP-binding, conserved site | Interproscan |
| IPR020568 all species → | Homologous_superfamily | Ribosomal protein uS5 domain 2-type superfamily | Interproscan |
| IPR006204 all species → | Domain | GHMP kinase N-terminal domain | Interproscan |
| IPR036554 all species → | Homologous_superfamily | GHMP kinase, C-terminal domain superfamily | Interproscan |
| IPR000705 all species → | Family | Galactokinase | Interproscan |
| IPR006206 all species → | Family | Mevalonate/galactokinase | Interproscan |
| IPR014721 all species → | Homologous_superfamily | Small ribosomal subunit protein uS5 domain 2-type fold, subgroup | Interproscan |
| IPR013750 all species → | Domain | GHMP kinase, C-terminal domain | Interproscan |
| IPR019741 all species → | Conserved_site | Galactokinase, conserved site | Interproscan |
| IPR019539 all species → | Domain | Galactokinase, N-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10457 all species → | MEVALONATE KINASE/GALACTOKINASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0004335 all species → | Molecular Function | galactokinase activity | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0006012 all species → | Biological Process | galactose metabolic process | Interproscan |
| GO:0046835 all species → | Biological Process | carbohydrate phosphorylation | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0016301 all species → | Molecular Function | kinase activity | Interproscan |
| GO:0016773 all species → | Molecular Function | phosphotransferase activity, alcohol group as acceptor | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K18674 | GALK2; N-acetylgalactosamine kinase | EC:2.7.1.157 | Amino sugar and nucleotide sugar metabolism | ko00520 | deepkoala |
Transcript abundance of XP_029180010.2 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
