Genomic Location: NW_025322765.1:10521...15025
NR annotation: XP_029190811.2, carboxypeptidase D-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_029190811.2 |
| Protein |
| XP_029190811.2 |
| UniProt accession | Description |
|---|---|
| P83852 | Carboxypeptidase D (Fragment) OS=Lophonetta specularioides OX=75873 GN=CPD PE=1 SV=1 |
| O89001 | Carboxypeptidase D OS=Mus musculus OX=10090 GN=Cpd PE=1 SV=2 |
| O75976 | Carboxypeptidase D OS=Homo sapiens OX=9606 GN=CPD PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000771 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13620 all species → | CarboxypepD_reg | Carboxypeptidase regulatory-like domain | Domain | Interproscan |
| PF00246 all species → | Peptidase_M14 | Zinc carboxypeptidase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050753 all species → | Family | Peptidase M14 domain-containing protein | Interproscan |
| IPR000834 all species → | Domain | Peptidase M14, carboxypeptidase A | Interproscan |
| IPR008969 all species → | Homologous_superfamily | Carboxypeptidase-like, regulatory domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11532 all species → | PROTEASE M14 CARBOXYPEPTIDASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004181 all species → | Molecular Function | metallocarboxypeptidase activity | Interproscan |
| GO:0005615 all species → | Cellular Component | extracellular space | Interproscan |
| GO:0006518 all species → | Biological Process | peptide metabolic process | Interproscan |
| GO:0016485 all species → | Biological Process | protein processing | Interproscan |
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
XP_029190811.2.Transcript abundance of XP_029190811.2 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
