Genomic Location: NW_025322765.1:314901...319160
NR annotation: XP_029190827.2, flotillin-2-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_029190827.2 |
| Protein |
| XP_029190827.2 |
| UniProt accession | Description |
|---|---|
| Q98TZ8 | Flotillin-2a OS=Danio rerio OX=7955 GN=flot2a PE=2 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0011413 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01145 all species → | Band_7 | SPFH domain / Band 7 family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036013 all species → | Homologous_superfamily | Band 7/SPFH domain superfamily | Interproscan |
| IPR001107 all species → | Domain | Band 7 domain | Interproscan |
| IPR027705 all species → | Family | Flotillin family | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13806 all species → | FLOTILLIN-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005886 all species → | Cellular Component | plasma membrane | Interproscan |
| GO:0016600 all species → | Cellular Component | flotillin complex | Interproscan |
| GO:0031410 all species → | Cellular Component | cytoplasmic vesicle | Interproscan |
| GO:0045661 all species → | Biological Process | regulation of myoblast differentiation | Interproscan |
| GO:0072659 all species → | Biological Process | protein localization to plasma membrane | Interproscan |
XP_029190827.2.Transcript abundance of XP_029190827.2 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
