Genomic Location: NW_025322765.1:449860...453003
NR annotation: XP_029190832.2, mitochondrial translation release factor in rescue-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_029190832.2 |
| Protein |
| XP_029190832.2 |
| UniProt accession | Description |
|---|---|
| Q80VP5 | Mitochondrial translation release factor in rescue OS=Mus musculus OX=10090 GN=Mtrfr PE=1 SV=1 |
| A5WUX7 | Mitochondrial translation release factor in rescue OS=Danio rerio OX=7955 GN=mtrfr PE=3 SV=1 |
| Q9H3J6 | Mitochondrial translation release factor in rescue OS=Homo sapiens OX=9606 GN=MTRFR PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0008620 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00472 all species → | RF-1 | RF-1 domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR052405 all species → | Family | Mitochondrial Translation Release Factor | Interproscan |
| IPR045853 all species → | Homologous_superfamily | Peptide chain release factor class I superfamily | Interproscan |
| IPR000352 all species → | Domain | Peptide chain release factor class I | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46203 all species → | PROBABLE PEPTIDE CHAIN RELEASE FACTOR C12ORF65 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0003747 all species → | Molecular Function | translation release factor activity | Interproscan |
| GO:0006415 all species → | Biological Process | translational termination | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K23498 | COXPD7; peptide chain release factor | - | Mitochondrial biogenesis | ko03029 | deepkoala |
Transcript abundance of XP_029190832.2 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
