Genomic Location: NW_025322801.1:125761...132055
NR annotation: XP_029190833.2, dapdiamide synthesis protein DdaC-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_029190833.2 |
| Protein |
| XP_029190833.2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000572 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02668 all species → | TauD | Taurine catabolism dioxygenase TauD, TfdA family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050411 all species → | Family | Alpha-ketoglutarate-dependent hydroxylases | Interproscan |
| IPR003819 all species → | Domain | TauD/TfdA-like domain | Interproscan |
| IPR042098 all species → | Homologous_superfamily | Taurine dioxygenase TauD-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10696 all species → | GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016491 all species → | Molecular Function | oxidoreductase activity | Interproscan |
XP_029190833.2.Transcript abundance of XP_029190833.2 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
