Genomic Location: NW_025322801.1:110104...118445
NR annotation: XP_029190837.2, peroxidasin homolog [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_029190837.2 |
| Protein |
| XP_029190837.2 |
| UniProt accession | Description |
|---|---|
| Q92626 | Peroxidasin homolog OS=Homo sapiens OX=9606 GN=PXDN PE=1 SV=2 |
| A4IGL7 | Peroxidasin OS=Xenopus tropicalis OX=8364 GN=pxdn PE=2 SV=1 |
| Q3UQ28 | Peroxidasin homolog OS=Mus musculus OX=10090 GN=Pxdn PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000302 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03098 all species → | An_peroxidase | Animal haem peroxidase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019791 all species → | Family | Haem peroxidase, animal-type | Interproscan |
| IPR050702 all species → | Family | Peroxidase Activity and Reactive Species Generation | Interproscan |
| IPR037120 all species → | Homologous_superfamily | Haem peroxidase domain superfamily, animal type | Interproscan |
| IPR010255 all species → | Homologous_superfamily | Haem peroxidase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11475 all species → | OXIDASE/PEROXIDASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004601 all species → | Molecular Function | peroxidase activity | Interproscan |
| GO:0006979 all species → | Biological Process | response to oxidative stress | Interproscan |
| GO:0020037 all species → | Molecular Function | heme binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K19511 | PXDN, VPO1; peroxidase | EC:1.11.1.7 | Enzymes with EC numbers | - | deepkoala |
Transcript abundance of XP_029190837.2 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
