Genomic Location: NC_058074.1:11825295...11838675
NR annotation: XP_029190842.2, uncharacterized protein LOC114957535 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_029190842.2 |
| Protein |
| XP_029190842.2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004914 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04103 all species → | CD20 | CD20-like family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007237 all species → | Family | CD20-like family | Interproscan |
XP_029190842.2 in Acropora millepora.| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
XP_029190842.2.Transcript abundance of XP_029190842.2 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
