Genomic Location: NC_058071.1:5733053...5738348
NR annotation: XP_029190857.2, HCLS1-binding protein 3-like isoform X1 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_029190857.2 |
| Protein |
| XP_029190857.2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006805 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00787 all species → | PX | PX domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001683 all species → | Domain | Phox homology | Interproscan |
| IPR036871 all species → | Homologous_superfamily | PX domain superfamily | Interproscan |
| IPR039701 all species → | Family | HCLS1-binding protein 3 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14431 all species → | HCLS1-BINDING PROTEIN 3 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0035091 all species → | Molecular Function | phosphatidylinositol binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K24094 | HS1BP3; HCLS1-binding protein 3 | - | Domain-containing proteins not elsewhere classified | ko04990 | deepkoala |
Transcript abundance of XP_029190857.2 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
