Gene detail

Detailed information of XP_029196881.2 in Acropora millepora

Genomic Location: NC_058069.1:27345112...27352295
NR annotation: XP_029196881.2, uncharacterized protein LOC114962115 [Acropora millepora]
Species abbreviation AMILL · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_029196881.2

ATGTCAGACATCAAAGACAATTTTCAGCTTTTCATCACTTTGCCAACAGATGATGTATGTACAATCAGAAAATTATCCAGGCAGATGTTCGTTTATGAACTTAAATCAAGAGTGGAGCTGAAAGCGGGTATTCCCGGTGACATTTTCTCGTTCTTTTTCATGAACGTACAACTGCAAGACAAGGAAACCCTCAAAGCATACAACCTCAAAAATGGCTGCATTGTAAGAGTCAAGGTGGAATCAAACTGGGTTGGTTTGTTTGAAGCATGTTGGAACGGAGATATCTTCGACGTTTTCGAAAACGGGGTTCAATTCTTAGACGAGGAAAAGTTTCCAGAGCATGACATTTCTCTTTGGAATAAACTGGTTATTCAACGCGCTACGCTTGCTTTATTTATTGCCTGTCATCGCGGTTATCTTGGGTTGATTTTAGAACTTATTAACCGAGCAGCTACAGATATCAATGGTACCACTTTGTTTGGACGCGGCGCCTTACACGCCGCCGCGTACCAAGGGTTTGTTGGCTGTGTAGCTTTGCTCCTTAGCGAAGGTGCAGTTCCTAATCAAATTGACATACAAGGCAAAACAGCTTTAGCGCTAGCAGGCGAAAACGGACATGTTCATTGCGAAAGACGGCTATGGCTTTATCAGATGAATTTATCAACATCTGCGCGACCGCCCCCAAGTCGCAGCGGTGGGTCCCATAAAATATTGGATGCCAGCTGTTATGAATCACCCATTACAGAAAAGAAAGACCATCGTGATCTTAATAACGATTACAATGATAATCTGGATCAAACAGAGAGAACTAAAGGCGTTCATTCCCGGCCACGTTTCACCTTGCCGCGTCAATTCACGAATTCATCAAGCCATAAATCGTCAAAATCAACTTCGAAGCATTGCCCTTTGATGCAAATTGCTGAAAAATACAGAAAAGAGCTTCGTGAGTATAACGAAGGAAGTTTGAACCTTCTACCGAGTGAAAATCGGTTAGAAGCGGAAAACGAGAAATTAGCGCACGGAGGACGAGCGACAAACCTTGATGCAAATTCCGAAGAAGAGGCGAAGGTTGTTGACGAAAGCGGCAATTTGAAAGAAACAGTAATTCCTTCGATGGAGTGTTCAACTTCAAGTTCTGGAGAAACAAAGGTTTCTGATGAAAAGGCAGAAGACGATAAGACACCCAGTGACTGGCTCGCAAAAACTCAAGCATTAAACGAACAAGGCTCTGGACGGGAAAAGGCAAAACAAGATCACGACAGGCTATCATCGGGAAGAGAAAATGCTATCCGCAAACTGGAGGTTGCAATGGCGGAGTCCCGTCTCGAAAGGCTAAACGTCATCTCGTCCCCTCAAGGTCAAGACACAAGGCCGCTTGATCATCAAAACAGCGAAAATGAAGCCGGGCAAAAAGAAGAGACTTCTTTGGCTGATATTCGGCAAGAATACTGCCATAGGAAGCCTGGGCAAACTTTTGAGAGCTGGTTAGAAATGAAAAGACATCAAGGAAAAAATAGACCATGCACTGCGCCTGCACCGAAGAGTAAGATGGGAAAAAGCCTTGAGCCAGAATTCTTTAAGAAGTGGTTGAATAGCAAACGTCACCAGCGAACGTATTCGAGTTCTGAATCCTCATCGAAATCGAAGAAGACGTTTATAAGCTCCGGAGGAATGACCTTTGATCGCTGGCTTGAAACGAAGTCAGCCAACCGTCCTTTAAGCGCGATGAATGACGTCATTCAGTCACGCGACAGTTCCCAAGGGATCAACAAAGTCCGGAAACCGGTTATCTGCGGTAAACCTTTCCAGTTGTGGTTGGCCGAGAAAAAAGCGACGGAGCAGTCGATTCACGATGCAGAAAACGAAGAAGAGAGCAAAAATCATCCCAGAAGTGGAAAAACATTTGAAGTGTGGCTACAAGATAAACATAAACAGAGACAAATTGAATTGGTTCAGAAAATAACAACGTCAAAAGAGCAAAAAAGGTTAGCTAAACTTGATCAGTTACGAAAATGGTTGAATCCACGCTATAAGACCTTCGATGATTGGCTCGCGATAAAAAACCACCAGGCCTTGTTGGAACGGAATCGAACGCTTGCACAGAATGAATCGATTAAACAACAGATAGCGGATGTCCCCGCGGATGAGAAGCATAAAGATGCTAAGATTGTTTACAATATTTGGCAAACCATGAAGGCTCTCAAGGAGTTGAGCGACGAAGAGATGAAGTACAAAGAGATGAAAACGCTGTGGGCTGCGAAGGAAAAAGAGAAAAAACAATCCAGAACGTTTAACGCTGTGAGAGCTCGAAGATTTAACTTGAAATCTAATTAG

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005891 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240 all species →	ubiquitin	Ubiquitin family	Domain	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR000626 all species →	Domain	Ubiquitin-like domain	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR039323 all species →	Family	Ankyrin repeat domain-containing protein 60	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22677 all species →	ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 60	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00161	PDHA, pdhA; pyruvate dehydrogenase E1 component subunit alpha	EC:1.2.4.1	Diabetic cardiomyopathy	ko05415	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.