Genomic Location: NC_058078.1:19631521...19634847
NR annotation: XP_029201982.2, G patch domain-containing protein 11-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_029201982.2 |
| Protein |
| XP_029201982.2 |
| UniProt accession | Description |
|---|---|
| Q6DGZ0 | G patch domain-containing protein 11 OS=Danio rerio OX=7955 GN=gpatch11 PE=2 SV=1 |
| Q6DF57 | G patch domain-containing protein 11 OS=Xenopus tropicalis OX=8364 GN=gpatch11 PE=2 SV=1 |
| Q8N954 | G patch domain-containing protein 11 OS=Homo sapiens OX=9606 GN=GPATCH11 PE=1 SV=4 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006029 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13821 all species → | DUF4187 | Domain of unknown function (DUF4187) | Domain | Interproscan |
| PF01585 all species → | G-patch | G-patch domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000467 all species → | Domain | G-patch domain | Interproscan |
| IPR025239 all species → | Domain | Domain of unknown function DUF4187 | Interproscan |
| IPR039249 all species → | Family | G patch domain-containing protein 11 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21032 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0000776 all species → | Cellular Component | kinetochore | Interproscan |
XP_029201982.2.Transcript abundance of XP_029201982.2 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
