Gene detail

Detailed information of XP_029203854.2 in Acropora millepora

Genomic Location: NC_058069.1:15614908...15634081
NR annotation: XP_029203854.2, transcription factor TFIIIB component B'' homolog [Acropora millepora]
Species abbreviation AMILL · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O94481	Transcription factor TFIIIB component B'' OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bdp1 PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005753 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15963 all species →	Myb_DNA-bind_7	Myb DNA-binding like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR039467 all species →	Domain	Transcription factor TFIIIB component B'', Myb domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22929 all species →	RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000126 all species →	Cellular Component	transcription factor TFIIIB complex	Interproscan
GO:0001156 all species →	Molecular Function	TFIIIC-class transcription factor complex binding	Interproscan
GO:0070898 all species →	Biological Process	RNA polymerase III preinitiation complex assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15198	BDP1, TFC5; transcription factor TFIIIB component B''	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.