Genomic Location: NC_058067.1:20330623...20339535
NR annotation: XP_029212879.2, uncharacterized protein LOC114976583 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_029212879.2 |
| Protein |
| XP_029212879.2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0010275 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00059 all species → | Lectin_C | Lectin C-type domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001304 all species → | Domain | C-type lectin-like | Interproscan |
| IPR016187 all species → | Homologous_superfamily | C-type lectin fold | Interproscan |
| IPR036179 all species → | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR003599 all species → | Domain | Immunoglobulin subtype | Interproscan |
| IPR016186 all species → | Homologous_superfamily | C-type lectin-like/link domain superfamily | Interproscan |
| IPR050111 all species → | Family | C-type lectin and snaclec domain-containing protein | Interproscan |
| IPR018378 all species → | Conserved_site | C-type lectin, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22803 all species → | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0038023 all species → | Molecular Function | signaling receptor activity | Interproscan |
XP_029212879.2.Transcript abundance of XP_029212879.2 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
