Detailed information of XP_029212905.2 in Acropora millepora

Genomic Location: NC_058067.1:36638988...36650375
NR annotation: XP_029212905.2, uncharacterized protein LOC114976601 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q924A2Protein capicua homolog OS=Mus musculus OX=10090 GN=Cic PE=1 SV=2
Q96RK0Protein capicua homolog OS=Homo sapiens OX=9606 GN=CIC PE=1 SV=3
Q04891Transcription factor SOX-13 OS=Mus musculus OX=10090 GN=Sox13 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008832 (this species only)
Transcription factor familybHLH · all TF in this species
Transcription factor familyHMG · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505
all species →		HMG_boxHMG (high mobility group) boxDomainInterproscan
PF07496
all species →		zf-CWCW-type Zinc FingerDomainInterproscan
PF00010
all species →		HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071
all species →		DomainHigh mobility group box domainInterproscan
IPR011124
all species →		DomainZinc finger, CW-typeInterproscan
IPR011598
all species →		DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036910
all species →		Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR036638
all species →		Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR050140
all species →		FamilySRY-related HMG-box transcription factorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10270
all species →		SOX TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0046983
all species →		Molecular Functionprotein dimerization activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_029212905.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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