Genomic Location: NC_058071.1:9858033...9868169
NR annotation: XP_029214036.2, putative uncharacterized protein DDB_G0281733 isoform X5 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_029214036.2 |
| Protein |
| XP_029214036.2 |
| UniProt accession | Description |
|---|---|
| P55390 | Probable cold shock protein y4cH OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a00060 PE=4 SV=1 |
| P54584 | Cold shock protein OS=Arthrobacter globiformis OX=1665 GN=csp PE=2 SV=1 |
| P72366 | Cold shock-like protein CspA OS=Stigmatella aurantiaca (strain DW4/3-1) OX=378806 GN=cspA PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002110 (this species only) |
| Transcription factor family | CSD · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00313 all species → | CSD | 'Cold-shock' DNA-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002059 all species → | Domain | Cold-shock protein, DNA-binding | Interproscan |
| IPR051373 all species → | Family | Lin-28 homolog RNA-binding protein | Interproscan |
| IPR012340 all species → | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46109 all species → | PROTEIN LIN-28 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003729 all species → | Molecular Function | mRNA binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0031054 all species → | Biological Process | pre-miRNA processing | Interproscan |
XP_029214036.2.
