Genomic Location: NC_058078.1:8281476...8291172
NR annotation: XP_044162829.1, cation channel sperm-associated protein subunit epsilon-like isoform X3 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044162829.1 |
| Protein |
| XP_044162829.1 |
| UniProt accession | Description |
|---|---|
| Q5SY80 | Cation channel sperm-associated auxiliary subunit epsilon OS=Homo sapiens OX=9606 GN=CATSPERE PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001538 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF15020 all species → | CATSPERD | Cation channel sperm-associated protein subunit delta | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR028751 all species → | Family | Cation channel sperm-associated auxiliary subunit delta/epsilon | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR33722 all species → | CATION CHANNEL SPERM-ASSOCIATED PROTEIN SUBUNIT DELTA-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0036128 all species → | Cellular Component | CatSper complex | Interproscan |
| GO:0030317 all species → | Biological Process | flagellated sperm motility | Interproscan |
| GO:0048240 all species → | Biological Process | sperm capacitation | Interproscan |
| GO:0097228 all species → | Cellular Component | sperm principal piece | Interproscan |
XP_044162829.1.Transcript abundance of XP_044162829.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
