Genomic Location: NC_058078.1:15801242...15811188
NR annotation: XP_044163130.1, uncharacterized protein LOC114966706 isoform X2 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044163130.1 |
| Protein |
| XP_044163130.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005751 (this species only) |
XP_044163130.1. This gene does have a gene model — the search simply returned no hit.| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR033349 all species → | Family | ATR-interacting protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR28594 all species → | ATR-INTERACTING PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000077 all species → | Biological Process | DNA damage checkpoint signaling | Interproscan |
| GO:0006281 all species → | Biological Process | DNA repair | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K10905 | ATRIP; ATR interacting protein | - | DNA repair and recombination proteins | ko03400 | deepkoala |
Transcript abundance of XP_044163130.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
