Genomic Location: NC_058078.1:18071981...18077655
NR annotation: XP_044163512.1, uncharacterized protein LOC114969533 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044163512.1 |
| Protein |
| XP_044163512.1 |
| UniProt accession | Description |
|---|---|
| A2RUC4 | tRNA wybutosine-synthesizing protein 5 OS=Homo sapiens OX=9606 GN=TYW5 PE=1 SV=1 |
| A2RSX7 | tRNA wybutosine-synthesizing protein 5 OS=Mus musculus OX=10090 GN=Tyw5 PE=2 SV=2 |
| E1C7T6 | tRNA wybutosine-synthesizing protein 5 OS=Gallus gallus OX=9031 GN=TYW5 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007700 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13621 all species → | Cupin_8 | Cupin-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003347 all species → | Domain | JmjC domain | Interproscan |
| IPR041667 all species → | Domain | Cupin-like domain 8 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12461 all species → | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016706 all species → | Molecular Function | 2-oxoglutarate-dependent dioxygenase activity | Interproscan |
XP_044163512.1.Transcript abundance of XP_044163512.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
