Gene detail

Detailed information of XP_044163880.1 in Acropora millepora

Genomic Location: NC_058079.1:11902049...11905887
NR annotation: XP_044163880.1, LOW QUALITY PROTEIN: uncharacterized protein LOC122948254, partial [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_044163880.1

ATGGCTACTAGTCACATGAGATCAATCACGAGCAGTGTTATCAAGTTCATCAAGACGTTGGTTAGTAAGTTTCGCTTGCTCTTCTCCAACCCACAGGCAGCAACAACACACTTGAATGAGTTGAGTGAATCACACAGTGAGCATAACAGTATCGAGGGAATGAGAACTTCCTGTTCATCGAACATAAATGAAGTTTCAGTACAGGTAAAATATAATAATAAACAGTACAGATCTCGCTACGATATTCATGTTAATTTGTGTCAACAGAACTTAAGACGAAGAAGGAGTAGAGCAGTGTCAAGAATTCCCACAATTCAAATAAAGCGTCTTCTGCAAAAGAGTAAAAAAGTTGTAATTAAAGTGCAAAAACATGTCCGAAGAGTTGTCCCACAGTCATCAAAGCTTCATGCATACTTGTGCAAAAAAGGCAGTGCTTACCATAAGTTAAATAGTGAATCTTATGGAATAGGTGGTCATCAACATAGATCAGTTAGAAAGCAGAGATCGAACCTCAGTAAAAAAGATTGCTGCCCAAAACAACAAAGGCTGTATTTGCTTTTTGTACAAACAAGAACCCGAAAACACAAAAAGTCAGTTGCCTGTGTTTATACTGATGAACATGGTTTGAAGAAATTAAAGTGCTCTTGTGTACAAATACTATGTGCTGCTCAGCGCATAATAGCATTAAGTGGTGATGTAGAGGAGAATCCTGGGCCTTGTACTCAAATAAATAATGACAAGAATGCTCAATGTGCCAAACAAGTCAATTCAGTTTCATTATTGGAATCCAGATTATCTGAACTTGGTAGAATTCCAGTCAATGTATTGGGAGATGGAAACTGTTTTTTCCCTGCAGTATCATGCCAGCTATATAACACCCCTGAGTATCATTTGTATATACGCTCTCTTGGAGTTCAACATCTTCTGCATCACCCTGAGTTGTATATAGAAAGCAACTTTGAATACTCTTGGCAAAACTACATGGATAATATGGCAAGGCAAGGAACATGGGCAGATAACATTATAATTCAAGCTGTTGCAAATTCTCTGAATATCACTATCAACATCATAGAGTCAGATGCAAATTTCTCCCCTGTGACAGTTATAAATCCAGTCAATAGTGATAGACAAACGACAAATATTTATATTGGCCATATACAGGAATATCATTATATGTCAACAATACCAGTACCAAATTCCAACACTTATGAAATGACATGTGGCAATGAGCCAATTCAAAAATCAGCAAGTTCAAATAAGAGCGAATTAGAACAATGTAAACAAAAACAGTTCTCACAAGATAAGAATGCCCCGCTTGTCAATGGAGACAAAAAAAATGGAAAGAGAGCAAAGTTATCTGAAAAAGATAAAGCAGAAAGGCGTAAAGCTTCTAAAAGAGAATTTATACAAAAGAAAAGGGAAAATCCAGACTACAGAAAAAGAGAAAACAGAATGAGATCAGTAGCTTCAGAATCTGTTACTAACATGGAACTAAGAGAAAAAATTGAAAGACGCAGGACTTCTCAAAGAGAATTTGTAAGAAAGAAGCGTGCAGAAGCTGTAACTAGATTAAAAGATAACAATAAGAGAATAAAATTATCAGAAGCAGACAAAGCTGACAAACGTAGGACTAGTAACAGAGAGAACATGAGAAAGAAACGACAGAATGTGCAAAAAGTGAACATCCAGAATAAGGCAAATTGTTATCATAATGGTGGGGTAATGTCAGACCCTGATGCTAATGCTTACAAATCTGTAATAAACAAGTTTCACAAGAAAATTAGTTGTGGCCCTGAGTACATATGTACTTGCTGTGATCAATTGTGGTACAAATCATCGGTTACTAAATGCAATGTTCAGTCTTGTATTACTGGAGTAAAAAGTGTTAACAATACTGAATGGATTTGTAATACTTGTCATTTGAATATAAAACAAGGTAAACTGCCTCAATGTTCTAAAGCAAATGGTATGGGTTTTCCTGATAAACCATCAGTGCTTGATTTGACCCCATTAGGACCACGAATTCCATTTATGCAAATCCGTGAACTTCCAAGAGGTGGTCAGCTGTCTATTCATGGAAATGTAGTTAATGTACCAAGTGATGTTAATTCAACTGTGCACACCCTACCTAGACTTATCAGTGACTCACAGACTATCCCAATAAAACTGAAGAGGAGATTAAGCTATAAGCATCATTATCAATTCCAAAATGTTAGGCCAAAAAAAGTATTAGAGGCAGCTCAATATATTGTCACTACAAGCGAGTTATTTAAAAGTGAAGGTATAGAGGTTCAAGATACATGGCAAAACACTGTCACCACACATTCTGAAGAAAATAGTGAATGGGGTGAATTTCTCAATAATGATAACATTGAAAAGGATTCTGAGAAAGAAATTCGAAATATTGTGAATAATAATAAGGACAATTCAGGTTGTTTAAATTCTGAAGCTATTGACGATGAAGATAATGACAATTGGTGTGAAGTTGATGAACGTCACTCAGGGGTGACAGACACTTTATTACAAGATCCAGAAATAGCAGGGAATGGTGATAATATTATAAGTTTTGCACCAGGAGAAGGAAATAAACCTTTAGGCATATTTATGGATAAAGATTCAGAATTTCTATCATTTCCCACAATTTTCTGTGGAAAACGTAGGGCAGATAACAAAACAAGGAAGGTTCCTGTTTCATATAGCTCAATAGCTAAGTGGGAATTGAGATGTCAGGACAGAAGAGCAGCACAATCAGTCCCCAATGTATTTTATAAGCTTAAAAAGCTACAAATCAAACAAATTCAGGATACTGCTAGCATTTCTCTTCGGAAATGTAAAACTAAAGGTAAAAAGTATACTGCCGGTGACTTTAAGTCAGACGATTATGTTAATAAGCTGATACATCTTGATGAAGGCTTTAGAGTATTAAAAAATCTAAGAGGAAGCCCAGCATATTTTCAAAAATGCAAAAAGGATTTGTTTGCTATGATACGTCAGCTTGGTAACCCTACATGGTTCTGTTCTTTCTCAGCCGCAGAAACAAGATGGACACATTTGCTCAAAACTCTTGGTAGAATTCTTGAAAAAAAAGAATATTCTAACGAAGAAATAAACAACATGACTTGGCAGCAAAAATCAAACCTTATCCAAAGAGACCCCATAACATGTGCAAGAAATTTTGAGCATATGGTGCAATTATTCATACATGATGTTCTTAGAAGTGATGTTATGCCAATAGGACAAATAGTTGATTTCTTTTACAGAGTTGAGTTTCAGCAAAGAGGAAGTCCTCATATTCATGGTCTGTTCTGGGTGAAAGATGCACCACAATATGGCAAAAATGACGAAAAGGAAATTGTCAATTTCATTGATAAATATGTCACTTGTCAGAAGGCAAATACCAGTGAAATGGAAGAACTTGTTAATCTTCAACTGCATAGGCATGCTAAAACATGTAAAAAAATGGGTCACAAAGTTTGCAGGTTTAACTTTCCCTTGCCACCAATGCGGCAAACTATTATATTAACACCTCTTGAGGAATATGAGACTTTTGATGATGACAAGCAGAAGAACATTAAAGAAAATGGAGAGAAAATTAAAGAACAACTTGACAGTATGAAATATGGTGAAGATATAAATTTTGATCAATTCCTTAAAAAAATAGCATTGACTGAGGAAAATTACATACTAGCATTAAGACACATAATTAAGCGAAACACTCTATTTTTAAAGAGACTGCCATCAGAAATAAGGATAAATAATTACAACACACAATTACTGAAAGCATGGAGAGCAAACATGGATATGCAATATGTGTTAGACCCTTATGCCTGTGCAACT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000131 (this species only)
Ubiquitin family	DUB\|OTU\|OTU · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20209 all species →	DUF6570	Domain of unknown function (DUF6570)	Domain	Interproscan
PF14214 all species →	Helitron_like_N	Helitron helicase-like domain at N-terminus	Family	Interproscan
PF02338 all species →	OTU	OTU-like cysteine protease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051055 all species →	Family	PIF1 DNA helicase	Interproscan
IPR046700 all species →	Domain	Domain of unknown function DUF6570	Interproscan
IPR003323 all species →	Domain	OTU domain	Interproscan
IPR025476 all species →	Domain	Helitron helicase-like domain	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47642 all species →	ATP-DEPENDENT DNA HELICASE	Interproscan

Gene Ontology

No Gene Ontology signature was detected for XP_044163880.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15601	KDM3; [histone H3]-dimethyl-L-lysine9 demethylase	EC:1.14.11.65	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.