Gene detail

Detailed information of XP_044164152.1 in Acropora millepora

Genomic Location: NC_058079.1:14447953...14454880
NR annotation: XP_044164152.1, ubiquitin-conjugating enzyme E2 U-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5VVX9	Ubiquitin-conjugating enzyme E2 U OS=Homo sapiens OX=9606 GN=UBE2U PE=1 SV=1
Q95LM1	Ubiquitin-conjugating enzyme E2 U OS=Macaca fascicularis OX=9541 GN=UBE2U PE=2 SV=1
Q95017	SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans OX=6239 GN=ubc-9 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007763 (this species only)
Ubiquitin family	E2\|UBC\|UBC · all ubiquitin genes in this species
Ubiquitin family	UBD\|UBC-like\|UBC · all ubiquitin genes in this species
Ubiquitin family	E2\|UEV\|UEV · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00179 all species →	UQ_con	Ubiquitin-conjugating enzyme	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016135 all species →	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR050113 all species →	Family	Ubiquitin-conjugating enzyme	Interproscan
IPR000608 all species →	Domain	Ubiquitin-conjugating enzyme E2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24067 all species →	UBIQUITIN-CONJUGATING ENZYME E2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0016574 all species →	Biological Process	obsolete histone ubiquitination	Interproscan
GO:0033503 all species →	Cellular Component	HULC complex	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0061631 all species →	Molecular Function	ubiquitin conjugating enzyme activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10584	UBE2U; ubiquitin-conjugating enzyme E2 U	EC:2.3.2.23	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.