Gene detail

Detailed information of XP_044164511.1 in Acropora millepora

Genomic Location: NC_058079.1:3269493...3288186
NR annotation: XP_044164511.1, broad substrate specificity ATP-binding cassette transporter ABCG2-like [Acropora millepora]
Species abbreviation AMILL · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_044164511.1

ATGGCCCATCATATATCAAGTAATGAACAGACACCTTTGTTAAGAACAGAGCAAACAACTTTCAAAAACCACAGAGCATGTGACACGCCAATGTATGATGACAAACCCATGGAGCATTCACAGCTCAGCCAGTCATTCTCAGATGATTCAGACCAACAAGGAAGAGAAGCTGTAATTTCGTACCACAACATTTGTTACTCTATCACCACCAAGGAGAAAGGAGTAAAAAAGGAGAGAGAAATTATCAAAAACCTCAGTGGCCTTGTGGAACCTGGACTAAATGCAATTCTTGGACCAACGGGAAGTGGAAAGACCACGCTTCTGGACATCTTAGCTGGGCGGAAGGATCCAAGCCGTCTTTCTGGCGTTGTTCTAGTAAATGGGGTCAAGCAGCCTGAAAATTTCAAATGTATGACAGGATATGTTGTGCAGGAAGATGTTGTTATGGGAACGTTGACAGTGAGAGAGAACTTGCATTTCTCAGCTTCCCTGAGACTGCCCAGTAAGCTGAGCAAATGGAAGCGCAATGACCGAGTAGAAGCGGCCATCAGTGACCTGGGCCTGTTTCATGTAGCGGAGTCCAAGGTTGGGAACGACTTTATCCGTGGGATTTCTGGCGGGGAGCGCAAACGCACCAACATTGGAATGGAGCTGATAATGTCGCCATCGGTTTTGTTTCTTGATGAACCAACCACTGGACTCGATGCTTCGACAGCTGTCTCTGTAGTTCAGCTTCTTCAAGGACTTGGTCGTCAAGGCAAAACAGTCATTATGTCCATACATCAGCCTCGATACTCTATCTTTAAGACCTTCGACACCTTATCGTTGCTGTCCAATGGCGAGTTTGTGTACCAAGGCCCGGCAAATCAAGCGATGAGGTATTTTGAGGAAATAGGTTTTGTATGTGAGCCACACAATAATCCGGCGGATTTTTTCATGGATGTTATTATTGAATGTGAAGCCAGTCAGCGGGACGGATTGGTTGTCAGCTCAGACGCAACCGTGATAACAGTCAATGAACACAGTCCAAAACCAGTCTTGCCGGACGTTTTTAAAAAGTCGAGGTTCGCTCAAACCGTTCTCGAGTCCACTGAGCCAATACTGCAGCGGTTCACAGCCAGGCAAGGGAGCGTGCGATTTTCCAAAGGAGAGAAGATCACCTATGCTACTTCCTTTTGTAGCCAGCTAATGACGGTATCAGGGCGAGCAGTGAAAAACATAGTGAGAAATCCACAGACATCAATTATGCAGTTGGTTGTCACCGTTATTTTTGCGGTTATTGTGGGTGCAATTTATTACCAACTCAAGAAAGATGAAAATGGTATACAAAACAGGGTCGGCGCGTTCTTCTTCTTGGTCATGAACATGATTTTTGGGAACTTGTCTGCAGTGGAATTATTCATCAAGGAGAGACCAATATTCATACACGAATGTGCCAGTGGATATTATCGAATCTCGGTGTATTTCTTGGCCAAAGTCTTGTGTGATGTCATCCCTTTACGACTCGTTCCGATCACAGTATTCTCCCTCATTGCGTATTTTATGATAGGTCTCGATCATGGTATTGATAAGTTTTTCATTTTTACGTTAACCCTCCTTCTGGCCAGCCTTTGCGCCAGCAGTGTAGCTTTCCTCGTTAGCGCATGCGTACGGACGTTCGCCATAGCAAATCTCCTAGTTGGTCTGCCATACGTCTTCATGATGGTATTTGGTGGTGTGTTGATAAATCTTAAATCTGTACTAAGTTGGCTCGCCTGGATAAAATACATCAGCATATTTCGGTATGCCATTGAGTCACTAGAGATAAACGAGCTTCACAAAATGGAATTCAGCTGTCCAAAGAACACCACCAATTGCTTACGTTTTGGAGATCAGTACCTGAAACTGCAAGGAGTTAAGGTGGATGACCTGTGGTACAATGAACTGGCCCTCGCGGTTATGACAGTCATCATAATGGGTTTTGCTTATATAGCTTTAAGACTTATCAAGAAAGAAAAGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4GZT4	Broad substrate specificity ATP-binding cassette transporter ABCG2 OS=Bos taurus OX=9913 GN=ABCG2 PE=3 SV=2
Q8MIB3	Broad substrate specificity ATP-binding cassette transporter ABCG2 OS=Sus scrofa OX=9823 GN=ABCG2 PE=2 SV=1
Q9UNQ0	Broad substrate specificity ATP-binding cassette transporter ABCG2 OS=Homo sapiens OX=9606 GN=ABCG2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002704 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01061 all species →	ABC2_membrane	ABC-2 type transporter	Family	Interproscan
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan
PF19055 all species →	ABC2_membrane_7	ABC-2 type transporter	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR050352 all species →	Family	ATP-binding cassette subfamily G transporters	Interproscan
IPR013525 all species →	Domain	ABC-2 type transporter, transmembrane domain	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR043926 all species →	Domain	ABC transporter family G domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48041 all species →	ABC TRANSPORTER G FAMILY MEMBER 28	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0042626 all species →	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0140359 all species →	Molecular Function	ABC-type transporter activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05681	ABCG2, CD338; ATP-binding cassette, subfamily G (WHITE), member 2	-	CD molecules	ko04090	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.