Gene detail

Detailed information of XP_044167582.1 in Acropora millepora

Genomic Location: NW_025322673.1:283005...298196
NR annotation: XP_044167580.1, uncharacterized protein LOC114962676 isoform X1 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_044167582.1

ATGAGAGCAGAAGTGTTCGGAGTCAAACGAAACCCAGAAAACCTTGCTCTAAATAAGCCAACAAGACAGTCCTCTGATTTCAATCGTTCCAGTGGGTCAGAAAATGCAGTGGATGGCAATCGCAATCCACTGTTTGATGCCAATGGAAACTGTGCTCTCACTGAACTAGAAGACCCCAGCTGGTGGCGAGTGGACCTGGGCACTGATTATGTGCCAGTTTCAGATGTTTTCATTGTCAATAGACTCTTTCCTGCATCTGCGCAGCAAACAAATGGATATTACCAAATCACATTAGGTGATGACAACGATGTGGACCGAAATCACCAATGCATTGGCTCGGTTAGCTTTAAAGATTTCATAGCTTCAACAGTATGTTACAGCAATCCATTGAAGACAGGCAGATATCTTGGTATTTTGACAACACAAGGGCGACGAACTCTCTCACTATGTGAGGTGGAAGTTTACTCGCGAGAAAATATTGCATTTCGCAAACCAACAAGGCAGAGTGACGTTGGCTCGAGCTCAACAAGTCGCAGCAGCAGAGCTGTGGATGGTAATAGCGAAACAAGACTAGGTCTCTCATGTACAGCTAGCAGTCTTGATGTAGCATTTACAAATCCATGGTGGAGAGTAGACTTAGAACAAGTGGAACCAGTGAATGAGGTTTACATTGTCAACCGAGGGGACTGCTGTGGGGAACGATTGAATCCATTTGAGATCAGAGTGGGGCTAGCATCCAGTGATAATGGTATCACCAATCCCTTGTGTGGCAGTGGCCTCAGTGTCCCCCAAGGAAGAGGTGTTTCCTTCTTCTGTCGTCCTGCTTTGTTTGGACAGTTCGTCACTATAAGAGTGACAAGATCTGCACCCACCCAACTGCATATCTGCGAAGTTGAAGTGTATTCTGAAAGAAGAGCATGTCAGATGCAAGCTGTTGGCATAACGAGCAGTTTAGCAATTCCAAGTCACCGCTTATCAGCCTCATCATCACGTGTTGGCTTTGAACCAGACAAAGGTCGACTGCATGGGGATGGTGCCTGGTCGCCCATTGATGGCAACAACCCTGATGACTTCTTACAAATCGATTTACAGTACAAGTACTTCATCTGTGCCGTTGCTACGCAGGGATACCCATTGACCTCCAGTAGTTTTTGGACAACAAAATACAGATTGCTGTTTTCAGTTAACGGCATGGATTGGCTCACCTATAAAGAAAATGGAATAGACAAGATCTTTAGTGGAAACAGTGGACAACAGGACATTATAAAACATAGTCTTAAGAGTTTTACTAAGGCAAGGTTTGTCAGGTTCCAGCCTACTGAATTTGAAAATCAGAAAGCACTGAGGGTGGAAGTGTATGGAGTTCCTACACCGACAGCTCCAAGTCAAGCTCCAACTGGATTTGATGTAACACGACTTACAAACACAAGTGTCCGCGCTTCCTGGAAATTACCACCAGTTGCCATTAGGGGATTTAAACTGCTCTACAGACTAAGAAACTCCTCAGATGAACTTTTCACTACTATCATTTTAAGCAATTCAACTTTGAGCAAAGATGTCTATGGTCTTGAAAAGAATGCAGAATATGAATTTCAAGTGTTGGCATTTACAGCAAATGGTAATGGTCCACTGAGCTCTATGATAATAGCAAGGACAAAGGAATTCGTAGTCCCTTCACAAGCTCCTGGTAACTTTACTGTGACTTCTCAAACTTCTACCAGCATCCTTGCTTCTTGGCAGCGTCCGTCAACATCAGATTCTTCAGTCATTACTGGGTACAAAATCTTTTACAAAAGGAAAGGTTCCCTTGGATCTGTGTACACGTTGCTCATTGATGATGCCACAAAGCTTTCTATCAATGTGACTGGTCTTCTGAAATACACCGAGTATGAATTTCAGATATTGGCTTTCACTTCTGCTGGCGATGGAGCCAATAGTTCTTCCGTTACAGAGAGAACAAAGGAAGATGTTCCTTCACAAGCTCCGGCCAACTTAAGTGTGGTTTCACAAACTTCTACTAGCATCTTAGCTTCTTGGCAACTTCCACCGGCAGACTCCAGAAATGGAATCATCCTTGGATTTAAGCTGTTTTACAAAAGAAAAGGCTCTGCTGAATCAGCAAACACTGAGATTGTTCGAGGTGGAACAACTTTCAGAAAAACAATCACTGGACTTCTCGAATACACTGAATATGAATTTCAAGTGTTGGCATTTACTGCTGTCGGTGATGGACTGAAAAGCTCCATTAGAACTGCGAGAACAGACACAGTTGCTGTTCCAGTCCTTAAGGAGGATGTCAGCCCAGCCTTTGTGATCTGTAAAATAGGAACACTATGTTCACTTTCCTGCTATGCAACAAGTGAATTTCCAAGAACAGTGGCTTACTCTTGGACAAAGGATGGCAGGAGTTTAGCTAACAGCAGGAAGATTAAAATCATTGACAACTCTATTGTCATCAGACCTCAGTACATGGAAGATTATGGGGTGTATGTGTGCAGAGCTTCAAATGGGATTTATGACACAACTTGCAATGTCACACTAGTGGAGATTCAAGAGGGTCAGATATTGACAGCTGCAGTCAAAAAAATGGAAAGTGATAGTCATGGTGGCCTTGTAACTATAATCACACTTTCCTGTGCCATTTTATTGTTGCTCATCTTCATTGGTCTGCTTTTATGGAAGCTAAGGGAAGTATCATCTCAAAATACCAAAGCCTCAGAAAAGCAGACCGGTCTTGGTGAAAAAAGTGGGCCCCACACTTTATCAGGCGAGACAGATGAGCGAGCATATATGGACTTACAACCCAGGCATCTGCAAATAGTTTCGCCTGAAAAAGCTGAGGTCCAGGGAGTACAAGAATATGATGACGTTATTGCATATTACAACATTGGACTCGATGAGAAGAGCAAAGTAGAAGATTACGAAGCAATTTCCATTTCGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q90610	Neogenin (Fragment) OS=Gallus gallus OX=9031 PE=2 SV=1
Q8AV58	Protein sidekick-1 OS=Gallus gallus OX=9031 GN=SDK1 PE=1 SV=1
Q0V8T9	Contactin-associated protein like 5-1 OS=Mus musculus OX=10090 GN=Cntnap5a PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000101 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR006585 all species →	Domain	Fucolectin tachylectin-4 pentraxin-1	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR051941 all species →	Family	Blood Group Antigen-Binding Lectin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45713 all species →	FTP DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_044167582.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.