Detailed information of XP_044168024.1 in Acropora millepora

Genomic Location: NW_025322696.1:41335...88862
NR annotation: XP_044168024.1, serine/threonine-protein kinase 31-like isoform X4 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99MW1Serine/threonine-protein kinase 31 OS=Mus musculus OX=10090 GN=Stk31 PE=1 SV=2
Q9BXU1Serine/threonine-protein kinase 31 OS=Homo sapiens OX=9606 GN=STK31 PE=1 SV=2
F1R237Tudor domain-containing 6 OS=Danio rerio OX=7955 GN=tdrd6 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002845 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00567
all species →
TUDORTudor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035437
all species →
Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR050621
all species →
FamilyTudor domain-containingInterproscan
IPR002999
all species →
DomainTudor domainInterproscan
IPR011009
all species →
Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22948
all species →
TUDOR DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for XP_044168024.1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K16316STK31, TDRD8; serine/threonine-protein kinase 31EC:2.7.11.1
Protein kinasesko01001deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_044168024.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

54Samples
0TPM > 0
2Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
whole larvae 30 0 0.00 0.00
branch 24 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (AMILL_TPM, StringTie quantification over 54 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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