Genomic Location: NW_025322697.1:220225...223527
NR annotation: XP_044168035.1, uncharacterized protein LOC122952047 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044168035.1 |
| Protein |
| XP_044168035.1 |
| UniProt accession | Description |
|---|---|
| Q868M7 | Galactose/N-acetylgalactosamine-binding lectin CEL-III OS=Pseudocnus echinatus OX=2592315 GN=cel3 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005671 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00652 all species → | Ricin_B_lectin | Ricin-type beta-trefoil lectin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR035992 all species → | Homologous_superfamily | Ricin B-like lectins | Interproscan |
| IPR028988 all species → | Homologous_superfamily | Hemolytic lectin CEL-III, C-terminal domain superfamily | Interproscan |
| IPR000772 all species → | Domain | Ricin B, lectin domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11675 all species → | N-ACETYLGALACTOSAMINYLTRANSFERASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004653 all species → | Molecular Function | polypeptide N-acetylgalactosaminyltransferase activity | Interproscan |
| GO:0005794 all species → | Cellular Component | Golgi apparatus | Interproscan |
| GO:0006493 all species → | Biological Process | protein O-linked glycosylation | Interproscan |
XP_044168035.1.Transcript abundance of XP_044168035.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
