Genomic Location: NW_025322712.1:57256...61838
NR annotation: XP_044168221.1, zinc finger protein 431-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044168221.1 |
| Protein |
| XP_044168221.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000216 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00096 all species → | zf-C2H2 | Zinc finger, C2H2 type | Domain | Interproscan |
| PF16622 all species → | zf-C2H2_11 | zinc-finger C2H2-type | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013087 all species → | Domain | Zinc finger C2H2-type | Interproscan |
| IPR036236 all species → | Homologous_superfamily | Zinc finger C2H2 superfamily | Interproscan |
| IPR041697 all species → | Domain | Zinc-finger C2H2-type 11 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24399 all species → | ZINC FINGER AND BTB DOMAIN-CONTAINING | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000978 all species → | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0001227 all species → | Molecular Function | DNA-binding transcription repressor activity, RNA polymerase II-specific | Interproscan |
| GO:0005654 all species → | Cellular Component | nucleoplasm | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
XP_044168221.1.Transcript abundance of XP_044168221.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
