Genomic Location: NW_025322822.1:196133...196997
NR annotation: XP_044170060.1, uncharacterized protein LOC122954091 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044170060.1 |
| Protein |
| XP_044170060.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0019604 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00098 all species → | zf-CCHC | Zinc knuckle | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036875 all species → | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| IPR001878 all species → | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR051714 all species → | Family | CCHC-type Zinc Finger Nucleic Acid Binding | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23002 all species → | ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
XP_044170060.1.Transcript abundance of XP_044170060.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
