Gene detail

Detailed information of XP_044172415.1 in Acropora millepora

Genomic Location: NC_058067.1:31300284...31310311
NR annotation: XP_044172415.1, kalirin-like, partial [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_044172415.1

ATGGCAGATGTTAAGCAAAAACCAGTGGTAGTTAGAATGTATGAAGAATTACAAGAAAAAAGCACAGCTCTGCTTGTCAATTTGGAACCTGATCCCACTACCAAGGAAATAGAAGATGTATACAACTGGATAAAGACTGTGGGAGAAGACTTTCTGGACAACAATAGAGTGATGGGGGATTCAGTGAAAACATCTCAAGACTTTGTGTATGCACACCGAGAGCTTGACTCAGAAAAGCAGGGTCTTGAAGACACAGTTGCCCAGGCTCTTGATGTATCTAAAGTTCGATCCAAGACAGACATTGCTAAAGTCCAAGACATACAAGATCTTTGGTCAAGATTCACTGCTCGTCTTCAATTTAGATTGAACTTGGCAAAAATGTACTTTGACTTTCATCGTCACAGGCAATTGCTTTTTGGTAAGCTTGATGAGTTAATAAATCAGCTGACAAGTGATGAACCCAAGGAGAATGTTGATGCCTCACCAGCAATGTTAGCTCGACAGGAACAGCTCAGGGATGCTATTCTTTCTGCCGCGGAGCAAATGCAGAAAGAGTCACGGACATTGTTGGAAGAACTTGGAAAGGTTCCTGAGGAGCAACATTTAGATAGAAGTGCAGCTGCTGATTGTATACAGGACTTCTTAGCCATACTGGACTCAAGGGTACATAAACTTGACCAGCTGTGGACACTCAGAGAAGAGCAACTTCATAAAAACAGACAACTTAGTGCTGAGTTTGTTCAGTTTGAAAAGGACACTCGTGAGGTTATTGTTTGGATAAAAGAACAGAGTGATACTTTTTTCCCCGTCAAAGTGGACTACAGCTCTCTTCCAGCAAATCCAGTAGAGCTGGAGGACAAACTCAGGCGATTCAAAGATGCTGCAAGGCGCACAGATGAAGATGTACAGTCTCACCTGCTGGCAGCCGAGCAGCTCTCTGAGGCTGAAGGTGGTTACAAGGCAGCCATTAGAGTCATAACAGATGAACTGCAGATTGCATATCAAAGATTTAAGACTCTCCTTTCAGATTATGAGGTTCTTTTGTCCATGTCAGCAACATTTTATTCAAGTGTTGAAAAGCTTCTTCAAATGATGGATGACATGATGTATGGAATGGAAAAAAAAGGATTACCTAGAGATCTGAATCAAGCACAGCTGCTCCTGCAAGATCATCTTGCCGATTACAAAACTGTGCATGAGCTCTTCAACTTCACCACTGTGCATGCTCAAGATGTTCTGAATAGAGCTGCTACATCAGCTGCTGTGTCAGTGTCACGTGACGAGATTAAAGGTTTTCTTGAGAAGTCAGAAGGGAGACATTCTGAGTGGCGCAGTGTGTGGGAACACCACAAGGTCAAGCTGGAGGAAAGTGTGCGTCTCTGCGAATTTCAGCAAGCTATCAGCACTGTCAATCTCACTATTGAAGAGCACACCCGAGACCTGTTGGCACTAAACAGAAAGTTTGGCATCACTCTCCTTGATGCTGTCACACTGTTGCAAGAGTCAGACTCTTTTCTTGAGTCAGTCAAGCCTGCAGATGCAGAAGTTGGTCGACTGGTTGAAGAAGCAGAAAAGTTGAGACAACTGAACCATCATGATGCACCTGCCATCTCACGGGAAGTGTCGGCAATGGATGCACGTTGGCAGAGGTTTCTCTCAAGGATGGAAGACCACAGAACTATGTTGGAGGCTTCAATTGAGTTCCATCAACTTTATGAACAAGCTTCTGTGTGGATAAGTGATAGTGAGCACTTTTTGAAAACCACTCAAGATGGGGCAAAGAGATGCAAAACTGAGGAAGAAGTCATTGATCTTCTTGACATGATGGAGGGCTTTGTGAAACCTGGCCTACACAAACAAGATGCACGTCTGAATAAACTGGCTGAACTCTCTGCCAAGCTCACCATGGAGGAGCCTCGTCTTAAAGCCAAGGGCCTCATGGTGAAACAAAAGGAAGTTGCTAAAAAGTTTGAACTCATGGACAATGATCTTTTCCGTTTAGCAGAGAGGCTCAGAGAAAGAAAACACCAGGGACTGCCTCCAGAGGCAGAGGAAGTAAAGGTAGAAAGTATTGAGGCTTATGAAAATGAACTGGCTCAGTCAGCACCTTTGTCAGATGAGTTTGAAAAACCAGTGCGTGTGAATGTTCTCTCTTCCTTTATCGATGGTGTTCTTGGAAGCAAAAGGGTTGGAGATCAGGAAGTCTATGAAGAAGCTGGTCCTGCTAAACGTCCACAAGTGTCGGTCAGAGTGAGGTCTGATGCTCCAGTCAGCTTTGAAGCTGAGCAAAAGATTGCACCTATCATCAAGTCTGAAATCCAAGGCTGGTTTGAAAGTGGAAAGGCTGTTAAACCTGTTGAGATCCCTGAGCATGAAATCTTTGTTCATATTAGTGAAGACACCAAAAGGGAAGCCAGTGAAGTGACTTTGGCTCCTTGGGGTGCTGAAGTGGTAAAGAAAGATGTGACAATCACTTCACTAGGGCCCTTTGTTAGCAAGGATATTGAAGTTGAGACAGCTTTGCAGACAGAAACAACTCAGCCAAGCCCACCAGATCAGGCTCAAATTATGAGGAAAAGGATCTGGAAGACAACAACAAGGGAAACTACTACAAGTATCAAGCAAGAAACAAGAACCGAAGTGGAAATGCTTGTTCCAGAAAAACCCGAGATGACCTCAAATTTGTATGTGTTTGGTGCTTTGCCCCCTTCTGAGAATCTGACAGTGGAGGTGCGGTCCAAGAAAACTGTTGAGAGCACACCTGACACGATGGAAATGACAAGCACCGAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001172 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00435 all species →	Spectrin	Spectrin repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018159 all species →	Repeat	Spectrin/alpha-actinin	Interproscan
IPR002017 all species →	Repeat	Spectrin repeat	Interproscan
IPR051336 all species →	Family	Rho GTPase-activating Guanine Nucleotide Exchange Factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22826 all species →	RHO GUANINE EXCHANGE FACTOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_044172415.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.