Gene detail

Detailed information of XP_044172759.1 in Acropora millepora

Genomic Location: NC_058067.1:20287425...20312347
NR annotation: XP_029212833.2, aldehyde dehydrogenase family 16 member A1-like isoform X1 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_044172759.1

ATGGCTTCTGTGCACACAGAAACTGAGACCTCGATGACAGAAAAATCAGTCGGTCCAGCAAAACTGAAAAAGAATCTCGCTATCGCACAGATCTTTGAAAGTTTAGAGTATGGTCCAGCACCAGAGGCTGCAAACAGCGTGAACTCATGGCTGCAAGAACATGGAAGGGACTTTGGACATTTTGTGAACGGCAAATGGCTGAAACCAAAGGGAAGGGAAATTTATGAAACAAGAAATCCAGCTACAGGAGAGACACTGGCGTCTACATTGCAAGGAGAGCAGGAGGACATAGATAATGCAGTTTCTGCAGCAAGAGAAGCATTTAAATCATGGAGTAAACTCCCTGGCCATGTACGAGCGCGCTATTTGTACAGTATAGCTCGGCATGTTCAAAAGCATGCTCGTCTAATTGCTGTGCTTGAAAGTATGGACAATGGCAAGCCAATCAGAGAAACTCGAGATGCTGATGTACAGATTGTTGTGAGACACTTGTATCACCATGCTGGTTGGGCACAACTGATGGATACTGAAATGAGAGATTGGAAGCCTGTAGGAGTTGTTGGTGCCATTGTTCCTTGGAATTTCCCGTTAATGTTACTGTGCTGGAAGGTGTGTCCTGCCCTTGCAATGGGAAACACAGTGGTTCTTAAGCCAGCAACATACACTAGACTGACTGCACTGTTGTTTGCTGAGATCTGTGCTGAGGCAGGGCTCCCACCTGGTGTTTTTAATGTAGTAACTGGCAATGGTGCATTTGGCAGCTCCCTTGCTGCCCATCCTGATGTTGACAAAGTGGCTTTTACTGGTTCTACTGAGGTAGGGAAAGTACTGCGCAGATTGACTGCTGGAAGTGGAAAGAAGCTTTCGTTGGAACTTGGTGGAAAATCCCCTGTTGTTGTGTTTGATTCAGCTGATTTGGACAGTGCAGTGGAGGGGATTGTGGATGCCATTTGGTTTAATCAGGGACAGGTTTGTAGTGCTGGATCACGTTTGATTGTTCAAGAGACCTGTGCTAAGCGATTGATTGACAAGATCAAAGAACGCATGACTCACCTTCGACTTGGTCACTGCCTTGACAAGAGTATAGACATGGGGGCAATAGTTGACCCATCACAGAAAAAGGCCATTGCAGCTTATGTTGAAGAGGCAAAGAGGCAGGGAGCTGAAGTGTTTCAAAGCTGTGCATCAATGCCGGAAGATGGATCATACTACCCACCTACCTTGATTACCAATGTTCAGCCAGTGTCCAAGATTGTGATGGAGGAGGTATTTGGTCCAGTTCTGACAGTTCTCCCATTCAGAACAGCCAAGGAAGGGATTGCTTTGGCCAACAATACTAATTATGGCCTTGCCGGAAGTGTATGGACAGAAAATTTATCACTTGCTTTAGAGGTTGCTATGAGTATCAAAGCTGGATCAGTTTGGGTCAATGGACATAACCTGTTTGATGCTGCAGCTGGATTTGGAGGCTACCGTGAGAGTGGATTTGGACGAGACGGTGGAAAAGAGGGTTTGTATGAGTATGTCTGCCCATCCTGGCAAGCACGACCTAGGCCATCTGTGGAGGATTATGATGTGAAGACGTTTGGTTCTTCGGTTCCTGCAGTAGTGCGAAATCCAAGTACCAGTCCTGTGAAAGCTCCAGACTGTAAAAGCGGAGAAACAGGCGGAGTTAAGCCACCAAGCATTGATCGCACCTACAAAGTTTACATTGGAGGGAATCAGAAGAGGCCAGATGGAAACTACTCTCGGCCAGTCTTGAACCCCAGTGGGGAGGTGATAGGACAAGTGGCTGAGGGAAACAGGAAGGACATCCGAGATGCTGTAGAGGCCGCACATAAAGCTGCACCAGGCTGGGGGAAAAGAGCTGCACACAATCGGGCTCAGATAGTGTACTATATGGCAGAGAACTTAGAGTTACGACACAGCGAGTTTAGCGAGCGACTTTGTAACATGACAGGTTGTTCCATACAAGAGGCCAAAAAAGAAGTGGACATGACAATTCAGCGCTTGTTTTACTGGGGTGCGTATGCAGATAAATATGGAGGAACCGTGCAGGAAACTCCATTCTACGGTGCCACCGTCAAAATCCATGAGCCGGTTGGAGTGATTGGCATTGCTTGTCCCGATAGATGTCCGTTAGTGGCATTTATATCTCTGTTAGCTCCTGCTGTCATAAGAGGCAACACTGTAGTTATTATACCAAGTCAGAGTCATCCAATGGTGGCGGTTGACATGTACCAGATCTTTGACACATCTGACTTACCTGGCGGTGTTGTTAACATCGTCACGGGTGACAGAGATCACTTGACCAAATACCTGACGGAGCACCAAGATGTGCAAGCCATGTGGTACTTTGGCTCCGCGGAGGGGAGCAAATTTGTGGAGTGGTCCTCCGCAGTGAACGTTAAACGCACCTTTGTGAACTACGGTCAGAGTCGAGACTGGTTTGACAACGCGCAGGGACATGGGGAAGAGTTTCTGTTTCATTCAACTGAGTGCAAGAACATTTGGCTTCCAATGGGAGACATCTTTGCAAATTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q571I9	Aldehyde dehydrogenase family 16 member A1 OS=Mus musculus OX=10090 GN=Aldh16a1 PE=1 SV=2
A6QR56	Aldehyde dehydrogenase family 16 member A1 OS=Bos taurus OX=9913 GN=ALDH16A1 PE=2 SV=1
Q3T1L0	Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004750 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00171 all species →	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016163 all species →	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan
IPR016162 all species →	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR015590 all species →	Domain	Aldehyde dehydrogenase domain	Interproscan
IPR029510 all species →	Conserved_site	Aldehyde dehydrogenase, glutamic acid active site	Interproscan
IPR016161 all species →	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11699 all species →	ALDEHYDE DEHYDROGENASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016620 all species →	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00128	ALDH; aldehyde dehydrogenase (NAD+)	EC:1.2.1.3	Alcoholic liver disease	ko04936	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.