Gene detail

Detailed information of XP_044174115.1 in Acropora millepora

Genomic Location: NC_058068.1:17265221...17268632
NR annotation: XP_044174115.1, ribonuclease H2 subunit A-like isoform X2 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2TBT5	Ribonuclease H2 subunit A OS=Bos taurus OX=9913 GN=RNASEH2A PE=1 SV=1
Q9CWY8	Ribonuclease H2 subunit A OS=Mus musculus OX=10090 GN=Rnaseh2a PE=1 SV=2
Q5U209	Ribonuclease H2 subunit A OS=Rattus norvegicus OX=10116 GN=Rnaseh2a PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005910 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01351 all species →	RNase_HII	Ribonuclease HII	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024567 all species →	Domain	Ribonuclease HII/HIII domain	Interproscan
IPR001352 all species →	Family	Ribonuclease HII/HIII	Interproscan
IPR023160 all species →	Homologous_superfamily	Ribonuclease HII, helix-loop-helix cap domain superfamily	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR004649 all species →	Family	Ribonuclease H2, subunit A	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10954 all species →	RIBONUCLEASE H2 SUBUNIT A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004523 all species →	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0006298 all species →	Biological Process	mismatch repair	Interproscan
GO:0032299 all species →	Cellular Component	ribonuclease H2 complex	Interproscan
GO:0043137 all species →	Biological Process	DNA replication, removal of RNA primer	Interproscan
GO:0016070 all species →	Biological Process	RNA metabolic process	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10743	RNASEH2A; ribonuclease H2 subunit A	EC:3.1.26.4	DNA replication proteins	ko03032	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.