Detailed information of XP_044174480.1 in Acropora millepora

Genomic Location: NC_058069.1:11037951...11294317
NR annotation: XP_044174480.1, uncharacterized protein LOC114956221 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9R0G6Cartilage oligomeric matrix protein OS=Mus musculus OX=10090 GN=Comp PE=1 SV=2
P49747Cartilage oligomeric matrix protein OS=Homo sapiens OX=9606 GN=COMP PE=1 SV=2
Q8JHW2Thrombospondin-3a OS=Danio rerio OX=7955 GN=thbs3a PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001058 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05735
all species →
TSP_CThrombospondin C-terminal regionFamilyInterproscan
PF02412
all species →
TSP_3Thrombospondin type 3 repeatDomainInterproscan
PF13385
all species →
Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF07645
all species →
EGF_CACalcium-binding EGF domainDomainInterproscan
PF12947
all species →
EGF_3EGF domainDomainInterproscan
PF13855
all species →
LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675
all species →
Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR028974
all species →
Homologous_superfamilyTSP type-3 repeatInterproscan
IPR008859
all species →
DomainThrombospondin, C-terminalInterproscan
IPR001611
all species →
RepeatLeucine-rich repeatInterproscan
IPR003367
all species →
RepeatThrombospondin, type 3-like repeatInterproscan
IPR018097
all species →
Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR002126
all species →
DomainCadherin-likeInterproscan
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR001881
all species →
DomainEGF-like calcium-binding domainInterproscan
IPR015919
all species →
Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR020894
all species →
Conserved_siteCadherin conserved siteInterproscan
IPR049883
all species →
DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR017897
all species →
RepeatThrombospondin, type 3 repeatInterproscan
IPR003591
all species →
RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR024731
all species →
DomainEGF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199
all species →
THROMBOSPONDINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0005576
all species →
Cellular Componentextracellular regionInterproscan
GO:0007155
all species →
Biological Processcell adhesionInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0062023
all species →
Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0007156
all species →
Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06825FBN1; fibrillin 1-Glycosaminoglycan binding proteinsko00536deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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