Detailed information of XP_044174533.1 in Acropora millepora

Genomic Location: NC_058069.1:11878462...11880436
NR annotation: XP_044174533.1, uncharacterized protein LOC114977316 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P0C8Y1Mitotic-spindle organizing protein 1 OS=Danio rerio OX=7955 GN=mzt1 PE=3 SV=1
Q0VFD6Mitotic-spindle organizing protein 1 OS=Xenopus tropicalis OX=8364 GN=mzt1 PE=3 SV=1
Q5U4M5Mitotic-spindle organizing protein 1 OS=Xenopus laevis OX=8355 GN=mzt1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010436 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12554
all species →		MOZART1Mitotic-spindle organizing gamma-tubulin ring associatedFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022214
all species →		FamilyMitotic-spindle organizing protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR28520
all species →		MITOTIC-SPINDLE ORGANIZING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000930
all species →		Cellular Componentgamma-tubulin complexInterproscan
GO:0000931
all species →		Cellular Componentgamma-tubulin ring complexInterproscan
GO:0005813
all species →		Cellular ComponentcentrosomeInterproscan
GO:0005819
all species →		Cellular ComponentspindleInterproscan
GO:0031021
all species →		Cellular Componentinterphase microtubule organizing centerInterproscan
GO:0033566
all species →		Biological Processgamma-tubulin complex localizationInterproscan
GO:0051415
all species →		Biological Processmicrotubule nucleation by interphase microtubule organizing centerInterproscan
GO:0090307
all species →		Biological Processmitotic spindle assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_044174533.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_044174533.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

54Samples
0TPM > 0
2Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
whole larvae 30 0 0.00 0.00
branch 24 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (AMILL_TPM, StringTie quantification over 54 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

TOP