Genomic Location: NC_058069.1:14676068...14677896
NR annotation: XP_044174652.1, MIT domain-containing protein 1-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044174652.1 |
| Protein |
| XP_044174652.1 |
| UniProt accession | Description |
|---|---|
| Q5I0J5 | MIT domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Mitd1 PE=2 SV=1 |
| Q8VDV8 | MIT domain-containing protein 1 OS=Mus musculus OX=10090 GN=Mitd1 PE=1 SV=1 |
| Q8WV92 | MIT domain-containing protein 1 OS=Homo sapiens OX=9606 GN=MITD1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007513 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04212 all species → | MIT | MIT (microtubule interacting and transport) domain | Domain | Interproscan |
| PF16565 all species → | MIT_C | Phospholipase D-like domain at C-terminus of MIT | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR032341 all species → | Domain | MITD1, C-terminal phospholipase D-like domain | Interproscan |
| IPR007330 all species → | Domain | MIT domain | Interproscan |
| IPR052817 all species → | Family | MIT domain-containing protein 1 | Interproscan |
| IPR038113 all species → | Homologous_superfamily | MITD1, C-terminal phospholipase D-like domain superfamily | Interproscan |
| IPR036181 all species → | Homologous_superfamily | MIT domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21222 all species → | UNCHARACTERIZED | Interproscan |
XP_044174652.1 in Acropora millepora.XP_044174652.1.Transcript abundance of XP_044174652.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
